BLASTX nr result

ID: Atractylodes22_contig00022523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022523
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containin...   167   2e-39
ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38
ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containin...   148   9e-34
ref|NP_027420.1| zinc finger CCCH domain-containing protein 17 [...   108   8e-22

>ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
           [Cucumis sativus] gi|449487921|ref|XP_004157867.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           17-like [Cucumis sativus]
          Length = 721

 Score =  167 bits (423), Expect = 2e-39
 Identities = 96/229 (41%), Positives = 139/229 (60%), Gaps = 16/229 (6%)
 Frame = +1

Query: 58  RYRPASVVPPPVMNEFPASRSNHGVYETQYVSDNDGILNGKDVDEYSREPTPGFDVLVDN 237
           RY+  + +P   +NE   SR+N    +  +V D+ G+ NGKD DE+ +E +PGFDVLVD+
Sbjct: 227 RYKTTNALP--TINECSLSRANR--LQQSHVIDDHGLQNGKDADEFLKESSPGFDVLVDD 282

Query: 238 ELGDSEYYPNEEQFGRSRGH---------DFDIGRSTDY----DVDRDMYGERRDYDHYN 378
           EL  S YY +EEQ+GRSRGH         D+DI  S DY    DVD D+Y +  DYD+ +
Sbjct: 283 ELRGSGYYGSEEQYGRSRGHEGGNMTSMNDYDINHSADYKMMGDVDHDVYNDVTDYDYES 342

Query: 379 EHDRMHCEGYAWEDHRTSSERMLGEAANFGRKRYPRDDSPDQFDKSDLRHRISKQRRGNV 558
                    Y W+  RTSS+++   +A   R+ +P+ +SP+     DLRHR++KQRRGN 
Sbjct: 343 RQGGQ----YGWDHRRTSSDKLSLSSAQMERRIFPKSNSPEHVQNVDLRHRLNKQRRGN- 397

Query: 559 GGLRSVVSREHSRDSHAD---RMPRRDNHHHRLDPGSLSSRLRGRIKIP 696
            GLRSV++ E++     +   R  RRD+H  +    ++S+RLRGRIK+P
Sbjct: 398 -GLRSVINNENAASRPEERNYRSSRRDSHSSQ--ESTVSNRLRGRIKLP 443


>ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|222852325|gb|EEE89872.1|
           predicted protein [Populus trichocarpa]
          Length = 721

 Score =  167 bits (422), Expect = 2e-39
 Identities = 105/230 (45%), Positives = 139/230 (60%), Gaps = 17/230 (7%)
 Frame = +1

Query: 58  RYRPASVVPPPVMNEFPASRSNHGVYETQYVSDNDGILNGKDVDEYSREPTPGFDVLVDN 237
           RY+ A++   P+M     SRS+  +++ Q V+D+  I NGKD DEY RE +PGFDVLVDN
Sbjct: 213 RYKAANL---PLMVNGNLSRSSR-LHQLQ-VADDHVIQNGKDADEYLRESSPGFDVLVDN 267

Query: 238 ELGDSEYYPNEEQFGRSRGH---------DFDIGRSTDYDV---DRDMYGERRDYDHYNE 381
           EL DS+YY  EEQ GR+ G+         ++D G S DY +   D++MY + R YD Y  
Sbjct: 268 ELRDSDYYHGEEQLGRTTGNEGRNLNSVDEYDTGHSADYGLLHDDQEMYRDPRGYDSYEL 327

Query: 382 HDRMHCEGYAWEDHRTSSERMLGEAANFGRKRYPRDDSPDQFDKSDLRHRISKQRRGNVG 561
               H    AWE HR SSERML       R+ Y + DSP+  ++SDLR+R+SKQRR  V 
Sbjct: 328 TPGQH----AWEQHRASSERMLMAPVLPERRGYAKADSPEHTEESDLRYRLSKQRR--VN 381

Query: 562 GLRSVVSREHSRDSHADR-----MPRRDNHHHRLDPGSLSSRLRGRIKIP 696
           GLRSVVS +   ++H +        RRD+H       S+SSRLRGRIK+P
Sbjct: 382 GLRSVVSNDFVPENHVEERGYRGSSRRDSHQLPSHESSISSRLRGRIKLP 431


>ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|222863779|gb|EEF00910.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score =  162 bits (411), Expect = 5e-38
 Identities = 104/231 (45%), Positives = 135/231 (58%), Gaps = 18/231 (7%)
 Frame = +1

Query: 58  RYRPASVVPPPVMNEFPASRSNHGVYETQYVSDNDGILNGKDVDEYSREPTPGFDVLVDN 237
           RY+ +S +PP V     +SRSN        V+D+    NGKD DEY RE +PGFDVLVD+
Sbjct: 228 RYK-SSNLPPEVNGN--SSRSNQ--LHLSRVADDHVNHNGKDADEYLRESSPGFDVLVDD 282

Query: 238 ELGDSEYYPNEEQFGRSRGH---------DFDIGRSTDYDV---DRDMYGERRDYDHYNE 381
           EL DS+YY  E+QFGR+ GH         ++  G   DY     D++ YG+ R YD Y  
Sbjct: 283 ELRDSDYYHGEDQFGRTIGHEGRNLNSVDEYGRGHPADYGSLPDDQERYGDPRGYDPYE- 341

Query: 382 HDRMHCEG-YAWEDHRTSSERMLGEAANFGRKRYPRDDSPDQFDKSDLRHRISKQRRGNV 558
               H +G +AWE HR SSERML   A+  R+ Y + DSP+  + SDLR+ +SKQRR  V
Sbjct: 342 ----HMQGQHAWEQHRASSERMLVAPAHLERRGYSKADSPEHIEGSDLRYLLSKQRR--V 395

Query: 559 GGLRSVVSREHSRDSHADR-----MPRRDNHHHRLDPGSLSSRLRGRIKIP 696
            GLRSVVS +    +H +        RRD+HH       +SSRLRGRIK+P
Sbjct: 396 NGLRSVVSNDFVPGNHVEERGYQGSSRRDSHHLLSHESPISSRLRGRIKLP 446


>ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
           [Glycine max]
          Length = 710

 Score =  148 bits (374), Expect = 9e-34
 Identities = 90/221 (40%), Positives = 125/221 (56%), Gaps = 15/221 (6%)
 Frame = +1

Query: 79  VPPPVMNEFPASRSNHGVYETQYVSDNDGILNGKDVDEYSREPTPGFDVLVDNELGDSEY 258
           + PPV N    +RSN        V D+    +GKD DE+ RE +PGFDVLV +EL +S+Y
Sbjct: 237 ISPPVTNGPIVARSNR--LHQARVPDDHNFQSGKDSDEFLRESSPGFDVLVADELRNSDY 294

Query: 259 YPNEEQFGRSRGHD---------FDIGRSTDYDVDRDMYGER-RDYDHYNEHDRMHCEGY 408
           Y  E++FG++RG D         +D+G S DY +  D+  ER R    Y  +D M  E Y
Sbjct: 295 YHGEDEFGKARGQDERNLDSLNEYDLGHSGDYSLAADIDRERFRGPQGYESYDHMQ-EPY 353

Query: 409 AWEDHRTSSERMLGEAANFGRKRYPRDDSPDQFDKSDLRHRISKQRRGNVGGLRSVVSRE 588
           AWE HR  S       ++ GR+   R DSP+  + SDLRH +SK+R+GN  GL+SV+S +
Sbjct: 354 AWEQHRKPS-------SHLGRRTRRRSDSPENAEVSDLRHHLSKRRKGN--GLKSVISHD 404

Query: 589 HSRDSHADRMPRR-----DNHHHRLDPGSLSSRLRGRIKIP 696
           H+   H +   RR     D+    L+  SL +R RGRIK+P
Sbjct: 405 HAHGGHGEEQSRRSFSRKDSLELPLNESSLGNRFRGRIKLP 445


>ref|NP_027420.1| zinc finger CCCH domain-containing protein 17 [Arabidopsis
           thaliana] gi|75268039|sp|Q9ZUM0.1|C3H17_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 17;
           Short=AtC3H17 gi|4038036|gb|AAC97218.1| expressed
           protein [Arabidopsis thaliana]
           gi|24030234|gb|AAN41294.1| unknown protein [Arabidopsis
           thaliana] gi|330250460|gb|AEC05554.1| zinc finger CCCH
           domain-containing protein 17 [Arabidopsis thaliana]
          Length = 669

 Score =  108 bits (271), Expect = 8e-22
 Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
 Frame = +1

Query: 85  PPVMNEFPASRS-NHGVYETQYVS-----DNDGILNGKDVDEYSREPTPGFDVLVDNELG 246
           P V  + P   S   G + TQ +      DN+   NGKD D+  RE +PGFDVLVDNE G
Sbjct: 219 PVVQRKGPGFPSFTEGGHSTQLLQKYGSDDNNSFHNGKDADDVLRESSPGFDVLVDNEAG 278

Query: 247 DSEYYPNEEQFGR---SRGH-DFDIGRSTDYDVDRDMYGERRDYDHYNEHDRMHCEGYAW 414
           DSEYY  E+++GR    RG+ ++D   S   D D++   E+R    ++ +DR    G  W
Sbjct: 279 DSEYYHVEDRYGRRSQERGNSEYDPDFSAIADGDKEALREQR----FDSYDRREDRG--W 332

Query: 415 EDHRTSSERMLGEAANFGRKRYPRDDSPDQFDKSDLRHRISKQRRGNVGGLR-SVVSREH 591
              R SSER         R+ Y  D+  +   +SDLR+R++KQR+GN  G+R SV   ++
Sbjct: 333 GHRRVSSER----EDRLDRRVYAEDERSENILESDLRYRLAKQRKGN--GMRLSVGGHDY 386

Query: 592 SR-DSHADRMPRRDNHHHRLDPGSLSSRLRGRIKI 693
           +  DS  DR  R        +    SSRL+GRIK+
Sbjct: 387 AAPDSSMDRGYRESRRDTPRENSISSSRLQGRIKL 421


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