BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022522
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   162   2e-38
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar...   160   1e-37
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   158   4e-37

>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  165 bits (417), Expect = 4e-39
 Identities = 85/161 (52%), Positives = 109/161 (67%), Gaps = 14/161 (8%)
 Frame = -1

Query: 441 AVHGHILRLHLYPSRIVCNSLLNMYASCLFED--------------VKSVFESMPKRNVI 304
           AVH H LR  + PSRIV NSLLNMY+ C                  V+ VF++M KR V+
Sbjct: 117 AVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVV 176

Query: 303 SWNILISWYVKVGVFAEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLL 124
           +WN LI+WYV+   +AEAV  F  MMK G+KP+ VSF+NVFPA + +GD + A+VV+G+L
Sbjct: 177 AWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGML 236

Query: 123 VKLGDEYSTDVFATSSAISMFAELGSLESARKIFDTSLERN 1
           VKLG EY  D++  SSAI M+AELG LE A+K+FD  LERN
Sbjct: 237 VKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 277



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
 Frame = -1

Query: 438 VHGHILRLHLYPSRIVCNSLLNMYASCLFEDVK-SVFESMPKRNVISWNILISWYVKVGV 262
           +H  +++        V N+L+ MY+ C   D    +F++MP+++V+SWN +IS +V+ G+
Sbjct: 336 LHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGL 395

Query: 261 FAEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLLVKLGDEYSTDVFAT 82
             EA+  F +M K  L    V+   +  A + + +  I    +G L++ G ++       
Sbjct: 396 NDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG---MD 452

Query: 81  SSAISMFAELGSLESARKIFDTS 13
           S  I M+A+ G +E+A+ +F+ S
Sbjct: 453 SYLIDMYAKSGLIEAAQNVFEKS 475


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  165 bits (417), Expect = 4e-39
 Identities = 85/161 (52%), Positives = 109/161 (67%), Gaps = 14/161 (8%)
 Frame = -1

Query: 441 AVHGHILRLHLYPSRIVCNSLLNMYASCLFED--------------VKSVFESMPKRNVI 304
           AVH H LR  + PSRIV NSLLNMY+ C                  V+ VF++M KR V+
Sbjct: 93  AVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVV 152

Query: 303 SWNILISWYVKVGVFAEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLL 124
           +WN LI+WYV+   +AEAV  F  MMK G+KP+ VSF+NVFPA + +GD + A+VV+G+L
Sbjct: 153 AWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGML 212

Query: 123 VKLGDEYSTDVFATSSAISMFAELGSLESARKIFDTSLERN 1
           VKLG EY  D++  SSAI M+AELG LE A+K+FD  LERN
Sbjct: 213 VKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 253



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
 Frame = -1

Query: 438 VHGHILRLHLYPSRIVCNSLLNMYASCLFEDVK-SVFESMPKRNVISWNILISWYVKVGV 262
           +H  +++        V N+L+ MY+ C   D    +F++MP+++V+SWN +IS +V+ G+
Sbjct: 312 LHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGL 371

Query: 261 FAEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLLVKLGDEYSTDVFAT 82
             EA+  F +M K  L    V+   +  A + + +  I    +G L++ G ++       
Sbjct: 372 NDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG---MD 428

Query: 81  SSAISMFAELGSLESARKIFDTS 13
           S  I M+A+ G +E+A+ +F+ S
Sbjct: 429 SYLIDMYAKSGLIEAAQNVFEKS 451


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329184|gb|EFH59603.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 824

 Score =  162 bits (411), Expect = 2e-38
 Identities = 83/158 (52%), Positives = 111/158 (70%), Gaps = 11/158 (6%)
 Frame = -1

Query: 441 AVHGHILRLHLYPSRIVCNSLLNMYASCL-----------FEDVKSVFESMPKRNVISWN 295
           AVH H++R     SR+V NSL+NMY SCL           ++ V+ VF++M ++NV++WN
Sbjct: 128 AVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMRRKNVVAWN 187

Query: 294 ILISWYVKVGVFAEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLLVKL 115
            LISWYVK G  AEA   F  MM+  +KP+ VSF+NVFPAVA     + A+V YGL++KL
Sbjct: 188 TLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKL 247

Query: 114 GDEYSTDVFATSSAISMFAELGSLESARKIFDTSLERN 1
           GDEY  D+F  SSAISM+AELG LES+R++FD+ +ERN
Sbjct: 248 GDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERN 285



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
 Frame = -1

Query: 435 HGHILRLHLYPSRIVCNSLLNMYASCLF-EDVKSVFESMPKRNVISWNILISWYVKVGVF 259
           HG + +       ++ NSL+ MY+ C F +    VF SM +R+V+SWN +IS +V+ G+ 
Sbjct: 345 HGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLD 404

Query: 258 AEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLLVKLGDEYSTDVFATS 79
            E +    +M K G K   ++   +  A + + +  I    +G L++ G ++       S
Sbjct: 405 DEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEG---MNS 461

Query: 78  SAISMFAELGSLESARKIFDTS 13
             I M+A+ G +  ++K+F+ S
Sbjct: 462 YLIDMYAKSGLIRISQKLFEGS 483



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = -1

Query: 381 LLNMYA-SCLFEDVKSVFESM--PKRNVISWNILISWYVKVGVFAEAVSHFVKMMKSGLK 211
           L++MYA S L    + +FE     +R+  +WN +IS Y + G   E    F KM++  ++
Sbjct: 463 LIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIR 522

Query: 210 PTVVSFINVFPAVAGMGDSRIADVVYGLLVKLGDEYSTDVFATSSAISMFAELGSLESAR 31
           P  V+  ++ PA + +G   +   ++G  ++       +VF  S+ + M+++ G+++ A 
Sbjct: 523 PNAVTVASILPACSQVGSVDLGKQLHGFSIR--QYLDQNVFVASALVDMYSKAGAIKYAE 580

Query: 30  KIFDTSLERN 1
            +F  + ERN
Sbjct: 581 NMFSQTKERN 590


>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
           gi|11994734|dbj|BAB03063.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|110739449|dbj|BAF01634.1| hypothetical protein
           [Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 820

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/154 (52%), Positives = 111/154 (72%), Gaps = 7/154 (4%)
 Frame = -1

Query: 441 AVHGHILRLHLYPSRIVCNSLLNMYASCL-------FEDVKSVFESMPKRNVISWNILIS 283
           AVH H++R     SR+V NSL+NMY SCL       ++ V+ VF++M ++NV++WN LIS
Sbjct: 128 AVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLIS 187

Query: 282 WYVKVGVFAEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLLVKLGDEY 103
           WYVK G  AEA   F  MM+  +KP+ VSF+NVFPAV+     + A+V YGL++KLGDEY
Sbjct: 188 WYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEY 247

Query: 102 STDVFATSSAISMFAELGSLESARKIFDTSLERN 1
             D+F  SSAISM+AELG +ES+R++FD+ +ERN
Sbjct: 248 VKDLFVVSSAISMYAELGDIESSRRVFDSCVERN 281



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/130 (25%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = -1

Query: 381 LLNMYA-SCLFEDVKSVFESM--PKRNVISWNILISWYVKVGVFAEAVSHFVKMMKSGLK 211
           L++MY+ S L    + +FE     +R+  +WN +IS Y + G   +    F KM++  ++
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518

Query: 210 PTVVSFINVFPAVAGMGDSRIADVVYGLLVKLGDEYSTDVFATSSAISMFAELGSLESAR 31
           P  V+  ++ PA + +G   +   ++G  ++       +VF  S+ + M+++ G+++ A 
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIR--QYLDQNVFVASALVDMYSKAGAIKYAE 576

Query: 30  KIFDTSLERN 1
            +F  + ERN
Sbjct: 577 DMFSQTKERN 586


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  158 bits (400), Expect = 4e-37
 Identities = 85/161 (52%), Positives = 107/161 (66%), Gaps = 14/161 (8%)
 Frame = -1

Query: 441 AVHGHILRLHLYPSRIVCNSLLNMYASCLFED--------------VKSVFESMPKRNVI 304
           A+H H+LR H   SRIV NSLLNMY++CL E               V+ VF++M KRNV+
Sbjct: 125 ALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVV 184

Query: 303 SWNILISWYVKVGVFAEAVSHFVKMMKSGLKPTVVSFINVFPAVAGMGDSRIADVVYGLL 124
           +WN +ISWYVK     EA   F  MM+ G++PT VSF+NVFPAV  M D   A+V+YGL+
Sbjct: 185 AWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLV 244

Query: 123 VKLGDEYSTDVFATSSAISMFAELGSLESARKIFDTSLERN 1
           VKLG +Y  D F  SSAI M+AELG ++ AR+IFD  LERN
Sbjct: 245 VKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERN 285