BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022521
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-24
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...    79   2e-22
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...    89   4e-16
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar...    88   6e-16

>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score = 92.4 bits (228), Expect(2) = 1e-24
 Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
 Frame = +3

Query: 213 WNAIIIGLICNHMPHEAILLYSQMKSKS--FLCDSYTYSSILKACADTRSLRIGKAVHGH 386
           WN IIIGL+CN+ P EA+L YS MKS S    CDSYTYSS+LKACADTR+L +GKAVH H
Sbjct: 38  WNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAH 97

Query: 387 ILQ 395
            L+
Sbjct: 98  FLR 100



 Score = 45.4 bits (106), Expect(2) = 1e-24
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +2

Query: 128 YRLSQLCREGQPHLARQLFDEIPKPTTVL 214
           + L +LC+EGQ HLARQLFD +P+P+TVL
Sbjct: 9   HELCRLCQEGQLHLARQLFDALPRPSTVL 37


>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score = 79.0 bits (193), Expect(2) = 2e-22
 Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
 Frame = +3

Query: 213 WNAIIIGLICNHMPHEAILLYSQMKSKSFLC--DSYTYSSILKACADTRSLRIGKAVHGH 386
           WN++IIG ICN++PH+A+LLY++M+S S     D YT+SS LKACA T+ +  GKA+H H
Sbjct: 83  WNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIHSH 142

Query: 387 ILQS 398
            L+S
Sbjct: 143 FLRS 146



 Score = 51.6 bits (122), Expect(2) = 2e-22
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 10/67 (14%)
 Frame = +2

Query: 44  VPSPSNT---PSHIHWTKDQLHPHPKPR-------TIRYRLSQLCREGQPHLARQLFDEI 193
           +P P +T   P+ IH   +Q     + +       +IR RLS+LCREGQPHLA  L D +
Sbjct: 16  IPLPISTTHPPNQIHTLPNQKQKQKQKQWNKAISTSIRSRLSKLCREGQPHLALHLLDSL 75

Query: 194 PKPTTVL 214
           P+P+TV+
Sbjct: 76  PRPSTVV 82


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/118 (45%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = +3

Query: 51  HHPIHLHTSIGPKISCTHIPNLEQFDTVLANYAEKANPILHANCSTKFPNQQP-FWNAII 227
           H P+H H S  PKI              L+   ++    L        P      WN II
Sbjct: 16  HLPLHTH-STNPKIPTIRYR--------LSRLCQEGQLHLARQLFDALPRPSTVLWNTII 66

Query: 228 IGLICNHMPHEAILLYSQMKSKS--FLCDSYTYSSILKACADTRSLRIGKAVHGHILQ 395
           IGL+CN+ P EA+L YS MKS S    CDSYTYSS+LKACADTR+L +GKAVH H L+
Sbjct: 67  IGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLR 124



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/55 (61%), Positives = 41/55 (74%)
 Frame = +2

Query: 50  SPSNTPSHIHWTKDQLHPHPKPRTIRYRLSQLCREGQPHLARQLFDEIPKPTTVL 214
           SPS+ P H H T      +PK  TIRYRLS+LC+EGQ HLARQLFD +P+P+TVL
Sbjct: 13  SPSHLPLHTHST------NPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVL 61


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329184|gb|EFH59603.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 824

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
 Frame = +3

Query: 99  THIPNLEQFDTVLANYAEKANPILHANCSTKFPNQQP-FWNAIIIGLICNHMPHEAILLY 275
           T  P      + L+   ++ NP L        P      WN IIIG ICN++PHEA+L Y
Sbjct: 34  TLTPQTPSIRSRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93

Query: 276 SQMKSKSFL--CDSYTYSSILKACADTRSLRIGKAVHGHILQ 395
           S+MK  +    CD+YTYSS LKACA+T++L+ GKAVH H+++
Sbjct: 94  SRMKKTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIR 135



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = +2

Query: 35  SLQVPSPSNTPSHIHWTKDQLHPHPKPRTIRYRLSQLCREGQPHLARQLFDEIPKPTTVL 214
           SLQ PS + T     ++   L P     +IR RLS++C+EG P LARQLFD IPKPTTVL
Sbjct: 15  SLQSPSQNQTRHSSTFSPPTLTPQTP--SIRSRLSKICQEGNPQLARQLFDAIPKPTTVL 72


>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
           gi|11994734|dbj|BAB03063.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|110739449|dbj|BAF01634.1| hypothetical protein
           [Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 820

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +3

Query: 99  THIPNLEQFDTVLANYAEKANPILHANCSTKFPNQQP-FWNAIIIGLICNHMPHEAILLY 275
           T  P      + L+   +  NP L        P      WN IIIG ICN++PHEA+L Y
Sbjct: 34  TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93

Query: 276 SQMKSKSFL--CDSYTYSSILKACADTRSLRIGKAVHGHILQ 395
           S+MK  +    CD+YTYSS LKACA+T++L+ GKAVH H+++
Sbjct: 94  SRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIR 135



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/60 (51%), Positives = 39/60 (65%)
 Frame = +2

Query: 35  SLQVPSPSNTPSHIHWTKDQLHPHPKPRTIRYRLSQLCREGQPHLARQLFDEIPKPTTVL 214
           SLQ PS + T     ++   L P     +IR RLS++C++G P LARQLFD IPKPTTVL
Sbjct: 15  SLQSPSQNQTRHSSTFSPPTLTPQTP--SIRSRLSKICQDGNPQLARQLFDAIPKPTTVL 72