BLASTX nr result

ID: Atractylodes22_contig00022500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022500
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536877.1| PREDICTED: signal recognition particle 9 kDa...   140   1e-31
ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|1...   140   1e-31
ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa...   140   1e-31
ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabi...   140   1e-31
ref|XP_003518888.1| PREDICTED: signal recognition particle 9 kDa...   139   2e-31

>ref|XP_003536877.1| PREDICTED: signal recognition particle 9 kDa protein-like [Glycine
           max]
          Length = 103

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/78 (82%), Positives = 73/78 (93%)
 Frame = -2

Query: 235 MVYVTSWDDFVERSVLLFRASPEKTRYAMKYRHSEGKLILKVTDDKECLKFKTDQAQDAK 56
           MVY+TSWD+FVERSV LFRA P+ TRY MKYRH EGKL+LKVTD+++CLK+KTDQAQ+AK
Sbjct: 1   MVYITSWDEFVERSVQLFRADPDSTRYLMKYRHCEGKLVLKVTDNRQCLKYKTDQAQEAK 60

Query: 55  KMEKLNNIFFTLMARGPE 2
           KMEKLNNIFFTLMARGPE
Sbjct: 61  KMEKLNNIFFTLMARGPE 78


>ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|118481739|gb|ABK92809.1|
           unknown [Populus trichocarpa]
           gi|222856271|gb|EEE93818.1| predicted protein [Populus
           trichocarpa]
          Length = 103

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/78 (80%), Positives = 72/78 (92%)
 Frame = -2

Query: 235 MVYVTSWDDFVERSVLLFRASPEKTRYAMKYRHSEGKLILKVTDDKECLKFKTDQAQDAK 56
           MVY+TSWDDFV+RSV LFRA P+ TRY MKYRH +GKL+LKVTD+KECLKFKTDQAQD K
Sbjct: 1   MVYITSWDDFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQDVK 60

Query: 55  KMEKLNNIFFTLMARGPE 2
           KMEKLNN+FFTLM+RGP+
Sbjct: 61  KMEKLNNLFFTLMSRGPD 78


>ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa protein [Vitis
           vinifera] gi|297735510|emb|CBI17950.3| unnamed protein
           product [Vitis vinifera]
          Length = 103

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/78 (82%), Positives = 72/78 (92%)
 Frame = -2

Query: 235 MVYVTSWDDFVERSVLLFRASPEKTRYAMKYRHSEGKLILKVTDDKECLKFKTDQAQDAK 56
           MVY+ SWD+FV+RSV LFRA P+ TRY MKYRH +GKL+LKVTD++ECLKFKTDQAQDAK
Sbjct: 1   MVYIESWDEFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 55  KMEKLNNIFFTLMARGPE 2
           KMEKLNNIFFTLMARGPE
Sbjct: 61  KMEKLNNIFFTLMARGPE 78


>ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabidopsis thaliana]
           gi|12230639|sp|Q9SMU7.1|SRP09_ARATH RecName: Full=Signal
           recognition particle 9 kDa protein; Short=SRP9
           gi|6522556|emb|CAB62000.1| signal recognition particle
           subunit 9-like [Arabidopsis thaliana]
           gi|21553473|gb|AAM62566.1| signal recognition particle 9
           kDa protein SRP9 [Arabidopsis thaliana]
           gi|28466801|gb|AAO44009.1| At3g49100 [Arabidopsis
           thaliana] gi|110736135|dbj|BAF00039.1| signal
           recognition particle subunit 9 - like [Arabidopsis
           thaliana] gi|332644977|gb|AEE78498.1| signal recognition
           particle subunit SRP9 [Arabidopsis thaliana]
          Length = 103

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/78 (82%), Positives = 72/78 (92%)
 Frame = -2

Query: 235 MVYVTSWDDFVERSVLLFRASPEKTRYAMKYRHSEGKLILKVTDDKECLKFKTDQAQDAK 56
           MVY+ SWD+FV+RSV LFRA PE TRY MKYRH +GKL+LKVTD+KECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 55  KMEKLNNIFFTLMARGPE 2
           KMEKLNNIFFTLMARGP+
Sbjct: 61  KMEKLNNIFFTLMARGPD 78


>ref|XP_003518888.1| PREDICTED: signal recognition particle 9 kDa protein-like [Glycine
           max]
          Length = 103

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/78 (80%), Positives = 73/78 (93%)
 Frame = -2

Query: 235 MVYVTSWDDFVERSVLLFRASPEKTRYAMKYRHSEGKLILKVTDDKECLKFKTDQAQDAK 56
           MVY+TSWD+FVERSV LFRA P+ TRY MKYRH +GKL+LKVTD+++CLK+KTDQAQ+AK
Sbjct: 1   MVYITSWDEFVERSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRQCLKYKTDQAQEAK 60

Query: 55  KMEKLNNIFFTLMARGPE 2
           KMEKLNNIFFTLMARGPE
Sbjct: 61  KMEKLNNIFFTLMARGPE 78


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