BLASTX nr result

ID: Atractylodes22_contig00022480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022480
         (1762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51243.1|AC055769_2 zinc-finger protein, putative; 7043-777...    60   2e-06
ref|NP_849742.2| lsd one like 1 protein [Arabidopsis thaliana] g...    60   2e-06
ref|XP_002890995.1| hypothetical protein ARALYDRAFT_473445 [Arab...    60   2e-06
ref|NP_564405.1| lsd one like 1 protein [Arabidopsis thaliana] g...    60   2e-06
ref|XP_003517373.1| PREDICTED: protein LOL1-like [Glycine max]         59   3e-06

>gb|AAG51243.1|AC055769_2 zinc-finger protein, putative; 7043-7771 [Arabidopsis thaliana]
          Length = 110

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +3

Query: 1170 GSENQPRELVCSTCRNLLFYPIGATSVFCVVLVCNSVTTVPPP 1298
            GS +   +LVCS CRNLL YP+GATSV C   VCN+VT VPPP
Sbjct: 27   GSTSGQSQLVCSGCRNLLMYPVGATSVCCA--VCNAVTAVPPP 67


>ref|NP_849742.2| lsd one like 1 protein [Arabidopsis thaliana]
            gi|332193378|gb|AEE31499.1| lsd one like 1 protein
            [Arabidopsis thaliana]
          Length = 187

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +3

Query: 1170 GSENQPRELVCSTCRNLLFYPIGATSVFCVVLVCNSVTTVPPP 1298
            GS +   +LVCS CRNLL YP+GATSV C   VCN+VT VPPP
Sbjct: 60   GSTSGQSQLVCSGCRNLLMYPVGATSVCCA--VCNAVTAVPPP 100


>ref|XP_002890995.1| hypothetical protein ARALYDRAFT_473445 [Arabidopsis lyrata subsp.
            lyrata] gi|297336837|gb|EFH67254.1| hypothetical protein
            ARALYDRAFT_473445 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +3

Query: 1170 GSENQPRELVCSTCRNLLFYPIGATSVFCVVLVCNSVTTVPPP 1298
            GS +   +LVCS CRNLL YP+GATSV C   VCN+VT VPPP
Sbjct: 27   GSTSGQSQLVCSGCRNLLMYPVGATSVCCA--VCNAVTAVPPP 67


>ref|NP_564405.1| lsd one like 1 protein [Arabidopsis thaliana]
            gi|186479127|ref|NP_001117399.1| lsd one like 1 protein
            [Arabidopsis thaliana] gi|75163743|sp|Q93ZB1.1|LOL1_ARATH
            RecName: Full=Protein LOL1; AltName: Full=Protein LSD ONE
            LIKE 1; Short=AtLOL1; AltName: Full=Putative zinc finger
            LOL1 gi|16323143|gb|AAL15306.1| At1g32540/T9G5_1
            [Arabidopsis thaliana] gi|21436015|gb|AAM51585.1|
            At1g32540/T9G5_1 [Arabidopsis thaliana]
            gi|33867796|gb|AAQ55219.1| LSD1-like [Arabidopsis
            thaliana] gi|332193377|gb|AEE31498.1| lsd one like 1
            protein [Arabidopsis thaliana]
            gi|332193379|gb|AEE31500.1| lsd one like 1 protein
            [Arabidopsis thaliana]
          Length = 154

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +3

Query: 1170 GSENQPRELVCSTCRNLLFYPIGATSVFCVVLVCNSVTTVPPP 1298
            GS +   +LVCS CRNLL YP+GATSV C   VCN+VT VPPP
Sbjct: 27   GSTSGQSQLVCSGCRNLLMYPVGATSVCCA--VCNAVTAVPPP 67


>ref|XP_003517373.1| PREDICTED: protein LOL1-like [Glycine max]
          Length = 147

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 1191 ELVCSTCRNLLFYPIGATSVFCVVLVCNSVTTVPPP 1298
            +LVCS CRNLL YP+GATSV C   VCN+VTTVPPP
Sbjct: 27   QLVCSGCRNLLLYPVGATSVCCA--VCNAVTTVPPP 60


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