BLASTX nr result
ID: Atractylodes22_contig00022454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00022454
(320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 139 3e-31
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi... 131 5e-29
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi... 128 6e-28
ref|XP_002511921.1| pentatricopeptide repeat-containing protein,... 121 7e-26
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2... 121 7e-26
>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product
[Vitis vinifera]
Length = 765
Score = 139 bits (349), Expect = 3e-31
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
NILI+SLC+ +V+ ALSLMD+M KGV+PNT T+NAM KGL KN LS+A LMD+MT
Sbjct: 666 NILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725
Query: 139 QACNPDYITMEILSDWLSAVGKVGKLKRFVQGYQVSSA 26
ACNPDYITMEIL++WLSAVG+ KLK FVQGY+VS++
Sbjct: 726 HACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVSAS 763
Score = 73.6 bits (179), Expect = 2e-11
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
N L+D +CKHG++ A+ +EM GKG++ N TY A+++ N + +A+ L D+M
Sbjct: 455 NTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 139 QACNPDYITMEILSDWLSAVGKVGK 65
C+PD I L LS GK+ +
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDR 539
Score = 60.5 bits (145), Expect = 1e-07
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEM-SGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMT 143
N LID LCK G+ E L L++ M S PNT TYN ++ G +M+ A L DQM
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443
Query: 142 NQACNPDYITMEILSDWLSAVGKVGKLKRFVQGYQ 38
P+ +T+ L D + G++ F Q
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478
>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 131 bits (330), Expect = 5e-29
Identities = 61/97 (62%), Positives = 79/97 (81%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
NILID+LC++ V+ A+SLM++M K VRPNTTTYNA+LKG+ K ML +A LMD+M
Sbjct: 643 NILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702
Query: 139 QACNPDYITMEILSDWLSAVGKVGKLKRFVQGYQVSS 29
+AC PDYITME+L++WLSAVG++ KLK FV+GYQ SS
Sbjct: 703 EACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSS 739
Score = 67.4 bits (163), Expect = 1e-09
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
N L+D LCKHG+V A+ +EM GKG++ N TY A++ N ++ A++ ++M +
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491
Query: 139 QACNPDYITMEILSDWLSAVGKV 71
C+PD + L L G++
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRM 514
Score = 64.3 bits (155), Expect = 1e-08
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMS-GKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMT 143
N LID LCK GK E LSL++EM G RPNT TYN ++ G A L QM
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420
Query: 142 NQACNPDYITMEILSDWLSAVGKVGKLKRF 53
+ P+ IT+ L D L G+V + F
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450
>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 128 bits (321), Expect = 6e-28
Identities = 60/92 (65%), Positives = 74/92 (80%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
NILIDSLCK +V ALSL+D+M +GV PNTTTYN++ K L KN L +A +LMD+M
Sbjct: 515 NILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVE 574
Query: 139 QACNPDYITMEILSDWLSAVGKVGKLKRFVQG 44
QACNPDYITMEIL++WLSAVG++ KLK+F QG
Sbjct: 575 QACNPDYITMEILTEWLSAVGEITKLKKFTQG 606
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
N LID LCK G+ E AL LM +M P T T+N ++ G + A +L ++M N
Sbjct: 232 NTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMEN 291
Query: 139 QACNPDYITMEILSDWLSAVGKVGKLKRFVQGYQ 38
P+ IT+ L D + ++ F + Q
Sbjct: 292 AQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQ 325
Score = 56.2 bits (134), Expect = 3e-06
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
N L+D +CKH ++ A+ M KG++ N TY + N +++A+ +D+M+
Sbjct: 302 NTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSK 361
Query: 139 QACNPDYITMEILSDWLSAVGKV 71
C PD + L L+ G++
Sbjct: 362 DGCFPDAVVYYTLICGLAQAGRL 384
>ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549101|gb|EEF50590.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 248
Score = 121 bits (303), Expect = 7e-26
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
NILIDSLC++ +E ALSLMD+M KGV+PNT TYNAM KGL + L++AL LMD+M
Sbjct: 156 NILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRERKWLNQALELMDRMME 215
Query: 139 QACNPDYITMEILSDWLSAVGKVGKLKR 56
Q CNPDYITMEIL++WLSAVG+ KLK+
Sbjct: 216 QPCNPDYITMEILTEWLSAVGETEKLKK 243
>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
predicted protein [Populus trichocarpa]
Length = 775
Score = 121 bits (303), Expect = 7e-26
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTN 140
NILI+SLCK+ KV+ A+SLM++M GV PNTTTYNA+ KGL + L + MD+M
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728
Query: 139 QACNPDYITMEILSDWLSAVGKVGKLKRFVQGYQVSSA 26
ACNPDYITMEIL++WLSAVG++ +LK+FV G +VSS+
Sbjct: 729 HACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSS 766
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 319 NILIDSLCKHGKVEHALSLMDEM-SGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMT 143
N LID LCK G+ + L LM+ M S KG P+T TYN ++ G + + L D+M
Sbjct: 387 NTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN 446
Query: 142 NQACNPDYITMEILSDWLSAVGKVGKLKRF 53
+ P+ +T+ L + G+V F
Sbjct: 447 KEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476
Score = 54.7 bits (130), Expect = 8e-06
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = -2
Query: 316 ILIDSLCKHGKVEHALSLMDEMSG--------KGVRPNTTTYNAMLKGLSTKNMLSEALR 161
ILI+ +CK +V+ AL ++++MSG V P+ YN ++ GL E L
Sbjct: 345 ILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLG 404
Query: 160 LMDQMTNQ-ACNPDYITMEILSDWLSAVGKVGKLK 59
LM++M +Q C PD IT L D G++ K K
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGK 439