BLASTX nr result

ID: Atractylodes22_contig00022424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022424
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   120   2e-25
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]   113   2e-23
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              112   5e-23
gb|AFW58695.1| putative RING zinc finger domain superfamily prot...   111   8e-23
ref|NP_001141318.1| LOC100273409 [Zea mays] gi|194703960|gb|ACF8...   111   8e-23

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score =  120 bits (301), Expect = 2e-25
 Identities = 68/134 (50%), Positives = 79/134 (58%)
 Frame = -3

Query: 402 QMDSEDDMHDANXXXXXXXXXXXXXXXXXXXXXXXXXYEFLXXXXXXXXXXXXNRQQKNY 223
           +M+SEDDMHDAN                          EF+            +R Q+NY
Sbjct: 65  KMESEDDMHDANDAESLDDFYSGETAADSDDLDAADY-EFIDNDSDDSDDLTSHRYQQNY 123

Query: 222 TILTEEDIHQRQEDDITRVSAVLSISRDSACMLLRRYNWSVNNVHEAWFTDEEKVRKAVG 43
           TILTE DI QRQEDDITR+S VLSI R SA +LLR Y WSV+ VH+ WF DEEKVRKAVG
Sbjct: 124 TILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVG 183

Query: 42  LLEKADIISPKSRE 1
           LLEK  +  P +RE
Sbjct: 184 LLEKPVVQFPNARE 197


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score =  113 bits (283), Expect = 2e-23
 Identities = 64/133 (48%), Positives = 72/133 (54%)
 Frame = -3

Query: 399 MDSEDDMHDANXXXXXXXXXXXXXXXXXXXXXXXXXYEFLXXXXXXXXXXXXNRQQKNYT 220
           M+SEDDMHDAN                                             +NYT
Sbjct: 1   MESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEGLFFPILHGFWLPFCGGLMQNYT 60

Query: 219 ILTEEDIHQRQEDDITRVSAVLSISRDSACMLLRRYNWSVNNVHEAWFTDEEKVRKAVGL 40
           ILTE DI QRQEDDITR+S VLSI R SA +LLR Y WSV+ VH+ WF DEEKVRKAVGL
Sbjct: 61  ILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGL 120

Query: 39  LEKADIISPKSRE 1
           LEK  +  P +RE
Sbjct: 121 LEKPVVQFPNARE 133


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = -3

Query: 240 RQQKNYTILTEEDIHQRQEDDITRVSAVLSISRDSACMLLRRYNWSVNNVHEAWFTDEEK 61
           R Q+NYTILTE DI QRQEDDITR+S VLSI R SA +LLR Y WSV+ VH+ WF DEEK
Sbjct: 47  RYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEK 106

Query: 60  VRKAVGLLEKADIISPKSRE 1
           VRKAVGLLEK  +  P +RE
Sbjct: 107 VRKAVGLLEKPVVQFPNARE 126


>gb|AFW58695.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 461

 Score =  111 bits (278), Expect = 8e-23
 Identities = 64/133 (48%), Positives = 76/133 (57%)
 Frame = -3

Query: 399 MDSEDDMHDANXXXXXXXXXXXXXXXXXXXXXXXXXYEFLXXXXXXXXXXXXNRQQKNYT 220
           M+SEDDMHDAN                          +F             +RQQ+NY+
Sbjct: 1   MESEDDMHDANDSAEDDFYSGGEAGLAASDDGDADY-DFADHDSDDSAELLSHRQQQNYS 59

Query: 219 ILTEEDIHQRQEDDITRVSAVLSISRDSACMLLRRYNWSVNNVHEAWFTDEEKVRKAVGL 40
           IL+E DI +RQEDDI RVS VLSIS+  AC+LLR YNWSV+ VH+ WF DEE+VRK VGL
Sbjct: 60  ILSEVDIKRRQEDDINRVSTVLSISKPEACVLLRNYNWSVSKVHDEWFADEERVRKVVGL 119

Query: 39  LEKADIISPKSRE 1
            EK  I  P  RE
Sbjct: 120 PEK-HIEMPNDRE 131


>ref|NP_001141318.1| LOC100273409 [Zea mays] gi|194703960|gb|ACF86064.1| unknown [Zea
           mays] gi|413918762|gb|AFW58694.1| putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 589

 Score =  111 bits (278), Expect = 8e-23
 Identities = 64/133 (48%), Positives = 76/133 (57%)
 Frame = -3

Query: 399 MDSEDDMHDANXXXXXXXXXXXXXXXXXXXXXXXXXYEFLXXXXXXXXXXXXNRQQKNYT 220
           M+SEDDMHDAN                          +F             +RQQ+NY+
Sbjct: 1   MESEDDMHDANDSAEDDFYSGGEAGLAASDDGDADY-DFADHDSDDSAELLSHRQQQNYS 59

Query: 219 ILTEEDIHQRQEDDITRVSAVLSISRDSACMLLRRYNWSVNNVHEAWFTDEEKVRKAVGL 40
           IL+E DI +RQEDDI RVS VLSIS+  AC+LLR YNWSV+ VH+ WF DEE+VRK VGL
Sbjct: 60  ILSEVDIKRRQEDDINRVSTVLSISKPEACVLLRNYNWSVSKVHDEWFADEERVRKVVGL 119

Query: 39  LEKADIISPKSRE 1
            EK  I  P  RE
Sbjct: 120 PEK-HIEMPNDRE 131


Top