BLASTX nr result

ID: Atractylodes22_contig00022419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022419
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK65758.1| GIGANTEA, partial [Chrysanthemum x morifolium]         108   3e-22
dbj|BAM67030.1| gigantea-like [Chrysanthemum seticuspe f. boreale]    108   3e-22
gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|...    96   3e-18
ref|XP_002307516.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002524341.1| Protein GIGANTEA, putative [Ricinus communis...    95   7e-18

>gb|AFK65758.1| GIGANTEA, partial [Chrysanthemum x morifolium]
          Length = 1151

 Score =  108 bits (271), Expect = 3e-22
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = +3

Query: 6    ATCGPAYQYLSIDVINWEADVGKCLTWEAHSRLATGMPIQYLDTAAKELGCPISI 170
            A CGPAYQYL++DV +WE+DVGKCLTWEAHSR+ATGMPIQYL+TAAKELGCPISI
Sbjct: 1097 AACGPAYQYLNVDVTDWESDVGKCLTWEAHSRIATGMPIQYLNTAAKELGCPISI 1151


>dbj|BAM67030.1| gigantea-like [Chrysanthemum seticuspe f. boreale]
          Length = 1145

 Score =  108 bits (271), Expect = 3e-22
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = +3

Query: 6    ATCGPAYQYLSIDVINWEADVGKCLTWEAHSRLATGMPIQYLDTAAKELGCPISI 170
            A CGPAYQYL++DV +WE+DVGKCLTWEAHSR+ATGMPIQYL+TAAKELGCPISI
Sbjct: 1091 AACGPAYQYLNVDVTDWESDVGKCLTWEAHSRIATGMPIQYLNTAAKELGCPISI 1145


>gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|AEK05866.1|
           gigantea-5 [Populus balsamifera]
           gi|339778019|gb|AEK05871.1| gigantea-5 [Populus
           balsamifera] gi|339778025|gb|AEK05876.1| gigantea-5
           [Populus balsamifera]
          Length = 173

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = +3

Query: 15  GPAYQYLSIDVINWEADVGKCLTWEAHSRLATGMPIQYLDTAAKELGCPISI 170
           GP+YQYL  DVINW+AD+ KCLTWEAHSRLATGMP+ +LDTAAKELGC ISI
Sbjct: 122 GPSYQYLRSDVINWQADIEKCLTWEAHSRLATGMPVHHLDTAAKELGCTISI 173


>ref|XP_002307516.1| predicted protein [Populus trichocarpa] gi|222856965|gb|EEE94512.1|
            predicted protein [Populus trichocarpa]
          Length = 1171

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = +3

Query: 15   GPAYQYLSIDVINWEADVGKCLTWEAHSRLATGMPIQYLDTAAKELGCPISI 170
            GP+YQYL  DVINW+AD+ KCLTWEAHSRLATGMP+ +LDTAAKELGC ISI
Sbjct: 1120 GPSYQYLRSDVINWQADIEKCLTWEAHSRLATGMPVHHLDTAAKELGCTISI 1171


>ref|XP_002524341.1| Protein GIGANTEA, putative [Ricinus communis]
            gi|223536432|gb|EEF38081.1| Protein GIGANTEA, putative
            [Ricinus communis]
          Length = 1161

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = +3

Query: 15   GPAYQYLSIDVINWEADVGKCLTWEAHSRLATGMPIQYLDTAAKELGCPISI 170
            GP+YQY +IDV +W+ D+ KCLTWEAHSRLATGMPIQ+LDTAAKELGC ISI
Sbjct: 1110 GPSYQYFNIDVTDWQTDIEKCLTWEAHSRLATGMPIQFLDTAAKELGCTISI 1161


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