BLASTX nr result

ID: Atractylodes22_contig00022343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022343
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521161.1| photosystem I reaction center subunit IV A, ...    94   1e-17
ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Popu...    93   2e-17
gb|ACJ85926.1| unknown [Medicago truncatula]                           89   4e-16
emb|CAD29821.2| putative photosystem I reaction centre subunit I...    89   4e-16
gb|AFK44960.1| unknown [Medicago truncatula]                           87   1e-15

>ref|XP_002521161.1| photosystem I reaction center subunit IV A, chloroplast precursor
           [Ricinus communis] gi|223539730|gb|EEF41312.1|
           photosystem I reaction center subunit IV A, chloroplast
           precursor [Ricinus communis]
          Length = 141

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
 Frame = +2

Query: 122 MAFCSIASAASGFVVKSNITTSEMITFKCTMIKFPSKYTRI--SRLVVKXXXXXXXXXXX 295
           MA CS+ASAASGF++  N+  +   + +  M+ FPSK   I  SRLVV+           
Sbjct: 1   MASCSMASAASGFLLTPNVPANTNSSSRSNMVYFPSKNNNINNSRLVVRAAEEAAAPAPA 60

Query: 296 XXXXXTDD---KPKPPLIGPKRGTKVRILRKESYWFKGVGSVVTVDQ 427
                 +    KPKPP IGPKRGTKV+ILR+ESYW+ G+GSVV VDQ
Sbjct: 61  TTTAPAEGEAPKPKPPPIGPKRGTKVKILRRESYWYNGIGSVVAVDQ 107


>ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Populus trichocarpa]
           gi|222843558|gb|EEE81105.1| hypothetical protein
           POPTRDRAFT_711610 [Populus trichocarpa]
          Length = 140

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/106 (51%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
 Frame = +2

Query: 122 MAFCSIASAASGFVVKSNITTSEMITFKCTMIKFPSKYTR--ISRLVVKXXXXXXXXXXX 295
           MA C++ASAASGF +   + T+   T K TM+ F SK      SRLVV+           
Sbjct: 1   MASCNMASAASGFALAPTVATNTNSTSKPTMLFFSSKNNNKNYSRLVVRSAEEGASPPAA 60

Query: 296 XXXXXTDD--KPKPPLIGPKRGTKVRILRKESYWFKGVGSVVTVDQ 427
                  +  KPKPP IGPKRGTKV+ILRKESYWF GVGSVV VDQ
Sbjct: 61  TTEPAVAEAPKPKPPPIGPKRGTKVKILRKESYWFNGVGSVVAVDQ 106


>gb|ACJ85926.1| unknown [Medicago truncatula]
          Length = 148

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 12/114 (10%)
 Frame = +2

Query: 122 MAFCSIASAASGFVVKSNI---TTSEMITFKCTMIKFPSKYTRI----SRLVVKXXXXXX 280
           MA  S+ASAA+GF++  N+   +T+   + + TM+ FP K   I    SRLVV+      
Sbjct: 1   MASSSMASAATGFLLSLNVAANSTTSSASSRSTMLMFPLKSNNIGSSSSRLVVRATGEAA 60

Query: 281 XXXXXXXXXXTDD-----KPKPPLIGPKRGTKVRILRKESYWFKGVGSVVTVDQ 427
                     T D     KPKPP IGPKRG+KV+ILRKESYW+KG GSVV VDQ
Sbjct: 61  PAAPAAPAAPTADAAPTPKPKPPPIGPKRGSKVKILRKESYWYKGTGSVVAVDQ 114


>emb|CAD29821.2| putative photosystem I reaction centre subunit IV [Populus x
           canadensis]
          Length = 140

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/106 (50%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
 Frame = +2

Query: 122 MAFCSIASAASGFVVKSNITTSEMITFKCTMIKFPSKYTR--ISRLVVKXXXXXXXXXXX 295
           MA C++ASAASGF +   + T+   T K TM+ F SK      SRLVV+           
Sbjct: 1   MASCNMASAASGFALTPAVATNTNSTSKPTMLFFSSKNNNKNYSRLVVRSAEEGASPPAA 60

Query: 296 XXXXXTDD--KPKPPLIGPKRGTKVRILRKESYWFKGVGSVVTVDQ 427
                  +  KPKPP IGPKRGTKV+ILRKESYWF G GSV  VDQ
Sbjct: 61  TTEPAVAEAPKPKPPPIGPKRGTKVKILRKESYWFNGFGSVAAVDQ 106


>gb|AFK44960.1| unknown [Medicago truncatula]
          Length = 148

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 12/114 (10%)
 Frame = +2

Query: 122 MAFCSIASAASGFVVKSNI---TTSEMITFKCTMIKFPSKYTRI----SRLVVKXXXXXX 280
           MA  S+ASAA+GF++  N+   +T+   + + TM+ FP K   I    SRLVV+      
Sbjct: 1   MASSSMASAATGFLLSLNVAANSTTSSASSRSTMLMFPLKSNNIGSSSSRLVVRATDEAA 60

Query: 281 XXXXXXXXXXTDD-----KPKPPLIGPKRGTKVRILRKESYWFKGVGSVVTVDQ 427
                       D     KPKPP IGPKRG+KV+ILRKESYW+KG GSVV VDQ
Sbjct: 61  PAAPAAPAAPAADAAPTPKPKPPPIGPKRGSKVKILRKESYWYKGTGSVVAVDQ 114


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