BLASTX nr result

ID: Atractylodes22_contig00022317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022317
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263213.1| PREDICTED: probable replication factor C sub...   347   3e-93
ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|2...   342   1e-91
ref|XP_002874350.1| nucleoside-triphosphatase/ nucleotide bindin...   338   2e-90
gb|AFK37872.1| unknown [Lotus japonicus]                              337   3e-90
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin...   337   3e-90

>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
            gi|296089274|emb|CBI39046.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  347 bits (891), Expect = 3e-93
 Identities = 171/198 (86%), Positives = 182/198 (91%)
 Frame = -3

Query: 1165 MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 986
            MLWVDKYRPKTLD ++VH+DVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMA+LRQMFG
Sbjct: 1    MLWVDKYRPKTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMAILRQMFG 60

Query: 985  PGAXXXXXXXXXXXVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 806
            P A           +DAG+RTIDLELTTLSSTHH+ELNP DAGFQDRYIVQEIIKEMAKN
Sbjct: 61   PSADKVKVENKTWKIDAGTRTIDLELTTLSSTHHMELNPGDAGFQDRYIVQEIIKEMAKN 120

Query: 805  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 626
            RPIDTKGKKGF+VLVLNEVD+LSREAQHSLRRTMEKYSASCRLILCC+SSSKVTEAVRSR
Sbjct: 121  RPIDTKGKKGFRVLVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 180

Query: 625  CLNVRINAPKEEQIVKVL 572
            CLN+RINAP EEQI KVL
Sbjct: 181  CLNIRINAPTEEQITKVL 198



 Score =  222 bits (566), Expect = 1e-55
 Identities = 111/139 (79%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 AARIAEKSGRSLRRAILSFETCRVQQYPFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRL 240
           A RIAEKS RSLRRAILSFETCRVQQYPFTNNQ +PPMDWEEYV+EIASDIMKEQSPKRL
Sbjct: 214 ATRIAEKSNRSLRRAILSFETCRVQQYPFTNNQAMPPMDWEEYVSEIASDIMKEQSPKRL 273

Query: 239 FQVRGKLYELLVNCIPPXXXXXXXXXXXXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFH 60
           FQVRGKLYELL+NCIPP                     EVCHWAAYYEHRMRLGQKAIFH
Sbjct: 274 FQVRGKLYELLINCIPPEIILKRLLLELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFH 333

Query: 59  IEAFVAKFMSIYKGFLIAT 3
           IEAFVAKFMSIYK FLIAT
Sbjct: 334 IEAFVAKFMSIYKAFLIAT 352


>ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|222862737|gb|EEF00244.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  342 bits (876), Expect = 1e-91
 Identities = 170/198 (85%), Positives = 183/198 (92%)
 Frame = -3

Query: 1165 MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 986
            MLWVDKYRPKTLD+V+VH+++A+NLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQ+FG
Sbjct: 1    MLWVDKYRPKTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG 60

Query: 985  PGAXXXXXXXXXXXVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 806
              A           +DAGSRTIDLELTTLSST+HVEL+PSD GFQDRYIVQEIIKEMAKN
Sbjct: 61   TSAEKVKVENRTWKIDAGSRTIDLELTTLSSTNHVELSPSDVGFQDRYIVQEIIKEMAKN 120

Query: 805  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 626
            RPIDTKGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCC+SSSKVTEA+RSR
Sbjct: 121  RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR 180

Query: 625  CLNVRINAPKEEQIVKVL 572
            CLNVRINAPKEEQIVKVL
Sbjct: 181  CLNVRINAPKEEQIVKVL 198



 Score =  212 bits (539), Expect = 2e-52
 Identities = 106/139 (76%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 AARIAEKSGRSLRRAILSFETCRVQQYPFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRL 240
           AARIA+KS RSLRRAILSFETCRVQQYPF++NQ IPPMDWEEYV+EI SDIM+EQSPKRL
Sbjct: 214 AARIADKSNRSLRRAILSFETCRVQQYPFSSNQAIPPMDWEEYVSEICSDIMREQSPKRL 273

Query: 239 FQVRGKLYELLVNCIPPXXXXXXXXXXXXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFH 60
           FQVRGKLYELL+NCIPP                     EVCHWAAYYEHRMR+GQKAIFH
Sbjct: 274 FQVRGKLYELLINCIPP-EIILKLLSELLKKLDEELKHEVCHWAAYYEHRMRMGQKAIFH 332

Query: 59  IEAFVAKFMSIYKGFLIAT 3
           +EAFVAKFMSIYK FLIAT
Sbjct: 333 LEAFVAKFMSIYKAFLIAT 351


>ref|XP_002874350.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
            lyrata subsp. lyrata] gi|297320187|gb|EFH50609.1|
            nucleoside-triphosphatase/ nucleotide binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 359

 Score =  338 bits (866), Expect = 2e-90
 Identities = 168/198 (84%), Positives = 182/198 (91%)
 Frame = -3

Query: 1165 MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 986
            MLWVDKYRPK+LDKV+VHED+AQNLKKLVTEQDCPHLLFYGP GSGKKTLIMALL+Q++G
Sbjct: 1    MLWVDKYRPKSLDKVIVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLKQIYG 60

Query: 985  PGAXXXXXXXXXXXVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 806
              A           VDAGSRTIDLELTTLSST+HVEL PSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61   ASAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 805  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 626
            RPIDTKGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYS+SCRLILCC+SSSKVTEA++SR
Sbjct: 121  RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 180

Query: 625  CLNVRINAPKEEQIVKVL 572
            CLNVRINAP +E+IVKVL
Sbjct: 181  CLNVRINAPSQEEIVKVL 198



 Score =  205 bits (521), Expect = 2e-50
 Identities = 106/144 (73%), Positives = 111/144 (77%), Gaps = 5/144 (3%)
 Frame = -2

Query: 419 AARIAEKSGRSLRRAILSFETCRVQQYPFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRL 240
           AARIAEKS RSLRRAILS ETCRVQ YPFT NQVI PMDWEEYV EIA+D+MKEQSPK+L
Sbjct: 214 AARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKL 273

Query: 239 FQVRGKLYELLVNCIPP-----XXXXXXXXXXXXXXXXXXXXXEVCHWAAYYEHRMRLGQ 75
           FQVRGK+YELLVNCIPP                          EVCHWAAYYEHRMRLGQ
Sbjct: 274 FQVRGKVYELLVNCIPPEVILKFMLSQRLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQ 333

Query: 74  KAIFHIEAFVAKFMSIYKGFLIAT 3
           KAIFHIEAFVAKFMSIYK FLI+T
Sbjct: 334 KAIFHIEAFVAKFMSIYKNFLIST 357


>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  337 bits (865), Expect = 3e-90
 Identities = 166/198 (83%), Positives = 181/198 (91%)
 Frame = -3

Query: 1165 MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 986
            MLWVDKYRPKTLD+V+VH+DVAQNLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 985  PGAXXXXXXXXXXXVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 806
              A           VDAGSR+IDLELTTLSS HH+E++PSDAGFQDRY+VQEIIKEMAKN
Sbjct: 61   TAAEKVKVENRTWKVDAGSRSIDLELTTLSSAHHIEMSPSDAGFQDRYVVQEIIKEMAKN 120

Query: 805  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 626
            RPIDTKGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCC+SSS+VTEA+RSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 625  CLNVRINAPKEEQIVKVL 572
            CLN+RINAP EEQIV+V+
Sbjct: 181  CLNIRINAPSEEQIVEVI 198



 Score =  219 bits (559), Expect = 8e-55
 Identities = 108/139 (77%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 AARIAEKSGRSLRRAILSFETCRVQQYPFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRL 240
           AARIAEKS R+LRRAILSFETCRVQQYPFTN Q IPPMDWEEY++EIASDIMKEQ+PKRL
Sbjct: 214 AARIAEKSNRNLRRAILSFETCRVQQYPFTNRQTIPPMDWEEYISEIASDIMKEQNPKRL 273

Query: 239 FQVRGKLYELLVNCIPPXXXXXXXXXXXXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFH 60
           FQVRGKLYELL+NCIPP                     EVCHWAAYYEHRMRLGQKAIFH
Sbjct: 274 FQVRGKLYELLINCIPPEMILKRLLFELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFH 333

Query: 59  IEAFVAKFMSIYKGFLIAT 3
           IEAFVAKFMS+YK FLIAT
Sbjct: 334 IEAFVAKFMSVYKSFLIAT 352


>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
            gi|255645652|gb|ACU23320.1| unknown [Glycine max]
          Length = 354

 Score =  337 bits (865), Expect = 3e-90
 Identities = 166/198 (83%), Positives = 182/198 (91%)
 Frame = -3

Query: 1165 MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 986
            MLWVDKYRPKTLD+V+VH D+A+NLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 985  PGAXXXXXXXXXXXVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 806
            PGA           VDAGSR++DLELTTLSS +H+E++PSDAGFQDRYIVQE+IKEMAKN
Sbjct: 61   PGAEKVKVDNRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120

Query: 805  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 626
            RPIDTKGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCC+SSS+VTEA+RSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 625  CLNVRINAPKEEQIVKVL 572
            CLNVRINAP EEQIV+VL
Sbjct: 181  CLNVRINAPSEEQIVEVL 198



 Score =  216 bits (550), Expect = 9e-54
 Identities = 107/139 (76%), Positives = 113/139 (81%)
 Frame = -2

Query: 419 AARIAEKSGRSLRRAILSFETCRVQQYPFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRL 240
           AARI EKS R+LRRAILSFETCRVQQYPFTN Q IPPMDWEEY++EIASDIMKEQSPKRL
Sbjct: 214 AARIVEKSNRNLRRAILSFETCRVQQYPFTNKQTIPPMDWEEYISEIASDIMKEQSPKRL 273

Query: 239 FQVRGKLYELLVNCIPPXXXXXXXXXXXXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFH 60
           FQVRGKLYELL+NCIPP                     EVCHWAAYYE+RMRLGQKAIFH
Sbjct: 274 FQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFH 333

Query: 59  IEAFVAKFMSIYKGFLIAT 3
           IEAFVAKFMSIYK FLI+T
Sbjct: 334 IEAFVAKFMSIYKSFLIST 352


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