BLASTX nr result

ID: Atractylodes22_contig00022279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022279
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546780.1| PREDICTED: translation initiation factor IF-...    81   3e-24
ref|XP_003531521.1| PREDICTED: translation initiation factor IF-...    81   9e-24
ref|XP_002890212.1| hypothetical protein ARALYDRAFT_471925 [Arab...    79   1e-23
ref|NP_173165.1| translation initiation factor IF-2 [Arabidopsis...    79   1e-23
gb|AAK32930.1|AF367343_1 At1g17220/F20D23_8 [Arabidopsis thalian...    79   1e-23

>ref|XP_003546780.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
            [Glycine max]
          Length = 1015

 Score = 80.9 bits (198), Expect(2) = 3e-24
 Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
 Frame = -2

Query: 308  ESNGLEILFYKVIYHLLDDVRTAIEGLIDPVEDQV*IGLADVHAVFSSGS-RIAGCMVAE 132
            E+  +EI  YKVIY L+DDVR A+EGL++PVE+ V IG A V AVFSSGS R+AGCMV E
Sbjct: 868  ENKAVEIRLYKVIYELIDDVRNAMEGLLEPVEEHVTIGSAVVRAVFSSGSGRVAGCMVTE 927

Query: 131  GKV 123
            GK+
Sbjct: 928  GKI 930



 Score = 55.8 bits (133), Expect(2) = 3e-24
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 121  QDCGVRVERKGKTVFVGILDSLRRIKEDVKEV 26
            QDCG+RV+RKGK V VGILDSLRR+KE VKEV
Sbjct: 932  QDCGIRVKRKGKVVHVGILDSLRRVKEIVKEV 963


>ref|XP_003531521.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
            [Glycine max]
          Length = 1010

 Score = 81.3 bits (199), Expect(2) = 9e-24
 Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = -2

Query: 308  ESNGLEILFYKVIYHLLDDVRTAIEGLIDPVEDQV*IGLADVHAVFSSGS-RIAGCMVAE 132
            E+  +EI  Y+VIY L+DDVR A+EGL++PVE+QV IG A V AVFSSGS R+AGCMV E
Sbjct: 863  ENKAVEIRLYRVIYELIDDVRKAMEGLLEPVEEQVTIGSAVVRAVFSSGSGRVAGCMVTE 922

Query: 131  GKV 123
            GK+
Sbjct: 923  GKI 925



 Score = 53.9 bits (128), Expect(2) = 9e-24
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -3

Query: 118  DCGVRVERKGKTVFVGILDSLRRIKEDVKEV 26
            DCG+RV+RKGK V VGILDSLRR+KE VKEV
Sbjct: 928  DCGIRVKRKGKVVHVGILDSLRRVKEIVKEV 958


>ref|XP_002890212.1| hypothetical protein ARALYDRAFT_471925 [Arabidopsis lyrata subsp.
            lyrata] gi|297336054|gb|EFH66471.1| hypothetical protein
            ARALYDRAFT_471925 [Arabidopsis lyrata subsp. lyrata]
          Length = 1027

 Score = 79.3 bits (194), Expect(2) = 1e-23
 Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = -2

Query: 308  ESNGLEILFYKVIYHLLDDVRTAIEGLIDPVEDQV*IGLADVHAVFSSGS-RIAGCMVAE 132
            E+ G+EI  Y+VIY L+DDVR A+EGL++ VE+Q+ IG A+V A FSSGS R+AGCMV E
Sbjct: 882  ENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIGSAEVRATFSSGSGRVAGCMVNE 941

Query: 131  GKVTR 117
            GK  +
Sbjct: 942  GKFVK 946



 Score = 55.1 bits (131), Expect(2) = 1e-23
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -3

Query: 121  QDCGVRVERKGKTVFVGILDSLRRIKEDVKEV 26
            +DCG+RV RKGKTV VG+LDSL+R+KE+VKEV
Sbjct: 946  KDCGIRVVRKGKTVHVGVLDSLKRVKENVKEV 977


>ref|NP_173165.1| translation initiation factor IF-2 [Arabidopsis thaliana]
            gi|334302824|sp|Q9SHI1.2|IF2C_ARATH RecName:
            Full=Translation initiation factor IF-2, chloroplastic;
            Flags: Precursor gi|332191439|gb|AEE29560.1| translation
            initiation factor IF-2 [Arabidopsis thaliana]
          Length = 1026

 Score = 79.3 bits (194), Expect(2) = 1e-23
 Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = -2

Query: 308  ESNGLEILFYKVIYHLLDDVRTAIEGLIDPVEDQV*IGLADVHAVFSSGS-RIAGCMVAE 132
            E+ G+EI  Y+VIY L+DDVR A+EGL++ VE+Q+ IG A+V A FSSGS R+AGCMV E
Sbjct: 881  ENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIGSAEVRATFSSGSGRVAGCMVNE 940

Query: 131  GKVTR 117
            GK  +
Sbjct: 941  GKFVK 945



 Score = 55.1 bits (131), Expect(2) = 1e-23
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -3

Query: 121  QDCGVRVERKGKTVFVGILDSLRRIKEDVKEV 26
            +DCG+RV RKGKTV VG+LDSL+R+KE+VKEV
Sbjct: 945  KDCGIRVVRKGKTVHVGVLDSLKRVKENVKEV 976


>gb|AAK32930.1|AF367343_1 At1g17220/F20D23_8 [Arabidopsis thaliana] gi|24111275|gb|AAN46761.1|
            At1g17220/F20D23_8 [Arabidopsis thaliana]
          Length = 1026

 Score = 79.3 bits (194), Expect(2) = 1e-23
 Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = -2

Query: 308  ESNGLEILFYKVIYHLLDDVRTAIEGLIDPVEDQV*IGLADVHAVFSSGS-RIAGCMVAE 132
            E+ G+EI  Y+VIY L+DDVR A+EGL++ VE+Q+ IG A+V A FSSGS R+AGCMV E
Sbjct: 881  ENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIGSAEVRATFSSGSGRVAGCMVNE 940

Query: 131  GKVTR 117
            GK  +
Sbjct: 941  GKFVK 945



 Score = 55.1 bits (131), Expect(2) = 1e-23
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -3

Query: 121  QDCGVRVERKGKTVFVGILDSLRRIKEDVKEV 26
            +DCG+RV RKGKTV VG+LDSL+R+KE+VKEV
Sbjct: 945  KDCGIRVVRKGKTVHVGVLDSLKRVKENVKEV 976


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