BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022240
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   257   2e-66
ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|2...   239   4e-61
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   239   5e-61
ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata] ...   233   3e-59
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   231   2e-58

>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  257 bits (657), Expect = 2e-66
 Identities = 144/246 (58%), Positives = 173/246 (70%), Gaps = 6/246 (2%)
 Frame = +2

Query: 53  TNSFVSFFHRSPPTHQRLSFTSCSGASNLDDEPRGEEEAFTGRRQPTNYAGVRLEESVEE 232
           T+     F R+P +  R+ F      SN  DEP     + +GRR  TNYAGVRLEE+V +
Sbjct: 16  TSQSALLFPRNPKSCSRV-FRILRACSNSTDEPL---VSVSGRR--TNYAGVRLEETVVD 69

Query: 233 VKS--GKIRLDTWISTKINGISRARVQSSIKSGLVSVNHRVTVKASHMVRHGDKVECTIS 406
           V S  GK+RLD+WIS++I GISRARVQSSI+SGLVSVN R+  K SH++R GDKV CTIS
Sbjct: 70  VNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCTIS 129

Query: 407 ELQPLKAEGEDIALDIVYEDDHVLVVNKPSHMVVHPAPGNAAGTLVNGLLHHCSLPTTSF 586
           ELQPL+AE EDI LDIVYED+HVLVVNKP+HMVVHPAPGNA+GTLVNG+LHHCSLPT + 
Sbjct: 130 ELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTVAL 189

Query: 587 HDQXXXXXXXXXXXXXXXXPSVHQTNSKDFSFGTN----ETSVRPGIVHRLDKGTSGLLV 754
            ++                  +       F+ G N    ET++RPGIVHRLDKGTSGLLV
Sbjct: 190 PNR------------DSEEDDISDDEFNSFAAGQNCGTCETNIRPGIVHRLDKGTSGLLV 237

Query: 755 VAKDDH 772
           VAKD+H
Sbjct: 238 VAKDEH 243


>ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  239 bits (611), Expect = 4e-61
 Identities = 136/235 (57%), Positives = 157/235 (66%)
 Frame = +2

Query: 68  SFFHRSPPTHQRLSFTSCSGASNLDDEPRGEEEAFTGRRQPTNYAGVRLEESVEEVKSGK 247
           SFF    PT  RL     S       EP   +       Q  NY+GV+LEESV+  KSGK
Sbjct: 43  SFFLSQKPTASRLLTVHSSSTR----EPNSNQNP----GQRINYSGVKLEESVDS-KSGK 93

Query: 248 IRLDTWISTKINGISRARVQSSIKSGLVSVNHRVTVKASHMVRHGDKVECTISELQPLKA 427
            RLD+WIS++I+GISRARVQSSIKSGLVSVN +V  K SH V+ GDKV C ISELQPL+A
Sbjct: 94  SRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVNCVISELQPLRA 153

Query: 428 EGEDIALDIVYEDDHVLVVNKPSHMVVHPAPGNAAGTLVNGLLHHCSLPTTSFHDQXXXX 607
           E E+I LDIVYED++VLVVNKP+HMVVHPAPGNA GTLVNG+LHHCSLPT S  +     
Sbjct: 154 EPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTVSSQE----- 208

Query: 608 XXXXXXXXXXXXPSVHQTNSKDFSFGTNETSVRPGIVHRLDKGTSGLLVVAKDDH 772
                         V   + +     +   SVRPGIVHRLDKGTSGLLVVAKD+H
Sbjct: 209 -------VLSGAEDVSDDDDEGLCSSSYAASVRPGIVHRLDKGTSGLLVVAKDEH 256


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  239 bits (610), Expect = 5e-61
 Identities = 125/197 (63%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
 Frame = +2

Query: 191 TNYAGVRLEESVEEV--KSGKIRLDTWISTKINGISRARVQSSIKSGLVSVNHRVTVKAS 364
           TNY G+RLEE+V+ V  KS K+RLD+WIS++I+GISRARVQSSIKSGLVSVN RV  K S
Sbjct: 51  TNYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVS 110

Query: 365 HMVRHGDKVECTISELQPLKAEGEDIALDIVYEDDHVLVVNKPSHMVVHPAPGNAAGTLV 544
           H V+ GDKV CTISELQPL+AE ED+ LDIVYED+H+LVVNKP HMVVHPAPGN  GTLV
Sbjct: 111 HNVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNPTGTLV 170

Query: 545 NGLLHHCSLPTTSFHDQXXXXXXXXXXXXXXXXPSVHQTNSKDFSFGTN-ETSVRPGIVH 721
           NG+LHHC+LPT +   Q                 +  +++  + S+ ++ E+S+RPGIVH
Sbjct: 171 NGILHHCNLPTVAISSQ------------EVLSDAEDRSDDDERSYSSSCESSIRPGIVH 218

Query: 722 RLDKGTSGLLVVAKDDH 772
           RLDKGTSGLLVVAKD+H
Sbjct: 219 RLDKGTSGLLVVAKDEH 235


>ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata]
            gi|297333465|gb|EFH63883.1| T4O12.25 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 930

 Score =  233 bits (594), Expect = 3e-59
 Identities = 124/197 (62%), Positives = 147/197 (74%), Gaps = 4/197 (2%)
 Frame = +2

Query: 194  NYAGVRLEESVEEVKSGKIRLDTWISTKINGISRARVQSSIKSGLVSVNHRVTVKASHMV 373
            N AG+R+EE+V+ +K GKIRLD+WIS+++NG+SRARVQSSI+ GLV+VN RV  K SH V
Sbjct: 567  NNAGLRIEETVDALK-GKIRLDSWISSRVNGVSRARVQSSIRLGLVTVNGRVVDKVSHNV 625

Query: 374  RHGDKVECTISELQPLKAEGEDIALDIVYEDDHVLVVNKPSHMVVHPAPGNAAGTLVNGL 553
            + GD+V CTISELQPLKAE EDI LDIVYED HVLVVNKP+HMVVHPAPGN  GTLVNG+
Sbjct: 626  KAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGI 685

Query: 554  LHHCSLPTTSFHDQXXXXXXXXXXXXXXXXPSVHQTNSKDFSFGTNET----SVRPGIVH 721
            LHHCSLP  S+ +                  S  +T S D    T+ +    SVRPGIVH
Sbjct: 686  LHHCSLPCVSYSN-------------AEDDDSDEETFSDDEEMTTSSSSYAASVRPGIVH 732

Query: 722  RLDKGTSGLLVVAKDDH 772
            RLDKGT+GLLVVAKD+H
Sbjct: 733  RLDKGTTGLLVVAKDEH 749


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  231 bits (588), Expect = 2e-58
 Identities = 130/247 (52%), Positives = 160/247 (64%), Gaps = 2/247 (0%)
 Frame = +2

Query: 38  TARTLTNSFVSFFHRSPPTHQRLSFTSCSGASNLDDEPRGEEEAFTGRRQP--TNYAGVR 211
           +ART+  S        PP  +R+       +SN       + + ++  +     NYAG R
Sbjct: 6   SARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTR 65

Query: 212 LEESVEEVKSGKIRLDTWISTKINGISRARVQSSIKSGLVSVNHRVTVKASHMVRHGDKV 391
           LEE+V+ V  GK+RLD+WIS +INGISRARVQSSI++GLVSVN RV  K SH V+ GD +
Sbjct: 66  LEETVD-VNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVI 124

Query: 392 ECTISELQPLKAEGEDIALDIVYEDDHVLVVNKPSHMVVHPAPGNAAGTLVNGLLHHCSL 571
            CTISELQPL+AE EDI LDIVYED+HVLVVNKP+HMVVHPAPGNA GTLVN +L+HCSL
Sbjct: 125 NCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSL 184

Query: 572 PTTSFHDQXXXXXXXXXXXXXXXXPSVHQTNSKDFSFGTNETSVRPGIVHRLDKGTSGLL 751
           P  +                     S  + +S       +E  +RPGIVHRLDKGTSGLL
Sbjct: 185 PMVA---------TSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLL 235

Query: 752 VVAKDDH 772
           VVAKD+H
Sbjct: 236 VVAKDEH 242