BLASTX nr result

ID: Atractylodes22_contig00022236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022236
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ77148.1| putative fructan 1-exohydrolase [Vernonia herbacea]   144   7e-33
pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase ...   140   1e-31
emb|CAC37922.1| fructan 1-exohydrolase IIa [Cichorium intybus] g...   140   1e-31
pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase ...   140   1e-31
emb|CAA72062.1| fructosidase [Cichorium intybus]                      140   1e-31

>emb|CAJ77148.1| putative fructan 1-exohydrolase [Vernonia herbacea]
          Length = 582

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/78 (88%), Positives = 77/78 (98%)
 Frame = +2

Query: 2   GAFGPFGMLAMASKDLEEQTAIFFRVFQNQNGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 181
           G FGPFG+LAMASKDL+EQTAIFFRVFQNQNGRYSVLMCSDLSRSTV+SNIDTTS+GAFV
Sbjct: 438 GVFGPFGLLAMASKDLKEQTAIFFRVFQNQNGRYSVLMCSDLSRSTVKSNIDTTSFGAFV 497

Query: 182 NIDPQYDEISLRNLIDHS 235
           +I+P+Y+EISLRNLIDHS
Sbjct: 498 DINPRYNEISLRNLIDHS 515


>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
           Cichorium Intybus gi|114793383|pdb|2ADD|A Chain A,
           Crystal Structure Of Fructan 1-Exohydrolase Iia From
           Cichorium Intybus In Complex With Sucrose
           gi|114793384|pdb|2ADE|A Chain A, Crystal Structure Of
           Fructan 1-Exohydrolase Iia From Cichorium Intybus In
           Complex With Fructose gi|114793389|pdb|2AEY|A Chain A,
           Crystal Structure Of Fructan 1-Exohydrolase Iia From
           Cichorium Intybus In Complex With 2,5
           Dideoxy-2,5-Immino-D-Mannitol
          Length = 543

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +2

Query: 2   GAFGPFGMLAMASKDLEEQTAIFFRVFQNQNGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 181
           GA GPFG+LAMASKDL+EQ+AIFFRVFQNQ GRYSVLMCSDLSRSTVRSNIDTTSYGAFV
Sbjct: 402 GALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 461

Query: 182 NIDPQYDEISLRNLIDHS 235
           +IDP+ +EISLRNLIDHS
Sbjct: 462 DIDPRSEEISLRNLIDHS 479


>emb|CAC37922.1| fructan 1-exohydrolase IIa [Cichorium intybus]
           gi|32492892|gb|AAP85536.1| fructan 1-exohydrolase IIa
           [Cichorium intybus]
          Length = 581

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +2

Query: 2   GAFGPFGMLAMASKDLEEQTAIFFRVFQNQNGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 181
           GA GPFG+LAMASKDL+EQ+AIFFRVFQNQ GRYSVLMCSDLSRSTVRSNIDTTSYGAFV
Sbjct: 440 GALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 499

Query: 182 NIDPQYDEISLRNLIDHS 235
           +IDP+ +EISLRNLIDHS
Sbjct: 500 DIDPRSEEISLRNLIDHS 517


>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
           From Cichorium Intybus In Complex With 1-Kestose
          Length = 543

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +2

Query: 2   GAFGPFGMLAMASKDLEEQTAIFFRVFQNQNGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 181
           GA GPFG+LAMASKDL+EQ+AIFFRVFQNQ GRYSVLMCSDLSRSTVRSNIDTTSYGAFV
Sbjct: 402 GALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 461

Query: 182 NIDPQYDEISLRNLIDHS 235
           +IDP+ +EISLRNLIDHS
Sbjct: 462 DIDPRSEEISLRNLIDHS 479


>emb|CAA72062.1| fructosidase [Cichorium intybus]
          Length = 581

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +2

Query: 2   GAFGPFGMLAMASKDLEEQTAIFFRVFQNQNGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 181
           GA GPFG+LAMASKDL+EQ+AIFFRVFQNQ GRYSVLMCSDLSRSTVRSNIDTTSYGAFV
Sbjct: 440 GALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFV 499

Query: 182 NIDPQYDEISLRNLIDHS 235
           +IDP+ +EISLRNLIDHS
Sbjct: 500 DIDPRSEEISLRNLIDHS 517


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