BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022168
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   396   e-108
ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   389   e-106
ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interactin...   379   e-103
ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interactin...   375   e-101
ref|XP_003594504.1| Pre-mRNA-processing factor [Medicago truncat...   374   e-101

>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
            [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
            protein product [Vitis vinifera]
          Length = 519

 Score =  396 bits (1018), Expect = e-108
 Identities = 197/266 (74%), Positives = 227/266 (85%), Gaps = 2/266 (0%)
 Frame = -3

Query: 1141 TRTREHIQAFPGHKGPVSCLTFRQGTSELFSGSYDRTIKIWNADDRSYITTLFGHQSDVL 962
            TRTREH++AFPGH+GPVSCLTFRQGTSELFSGS+DRTIKIW+A+DR+YIT+LFGHQS+VL
Sbjct: 254  TRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVL 313

Query: 961  TIDCLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASSLECCCFISNDEFLSGSDDGSIE 782
            +IDCLRKERVLTVGRDR+M LWKVPEES+LVFRAPASSLECCCFI+NDEFLSGSDDGSIE
Sbjct: 314  SIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSGSDDGSIE 373

Query: 781  HWGVLRKKPLHIVKNAHP-SLTPNKLDGGQNDDLSNGSKDN-LHPTPEKLCPSAHSWVSS 608
             WG+LRKKP++IVKNAH  S T  + +      + NG  +N  H   +  C +A+SWVSS
Sbjct: 374  LWGMLRKKPVYIVKNAHALSATLRQPEQSDVGKIPNGYIENGNHNHEDYNCSTAYSWVSS 433

Query: 607  VAVCRGSDLAASGAGNGMVRLWEIESDAKGIHPLFELPLVGYVNSLAFANSGKFLVAGVG 428
            V VCR SDLAASGA NG VRLW I S+ K I PLF LPLVG+VNSLAF+ SG+FLVAGVG
Sbjct: 434  VTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVG 493

Query: 427  KEPRLGRWGCLPAARHGVAVHPLQLS 350
            +EPRLGRWG LPAAR+GVAV  L+LS
Sbjct: 494  QEPRLGRWGRLPAARNGVAVQSLKLS 519


>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
            [Vitis vinifera]
          Length = 500

 Score =  389 bits (999), Expect = e-106
 Identities = 194/264 (73%), Positives = 222/264 (84%)
 Frame = -3

Query: 1141 TRTREHIQAFPGHKGPVSCLTFRQGTSELFSGSYDRTIKIWNADDRSYITTLFGHQSDVL 962
            TRTREH++AFPGH+GPVSCLTFRQGTSELFSGS+DRTIKIW+A+DR+YIT+LFGHQS+VL
Sbjct: 254  TRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVL 313

Query: 961  TIDCLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASSLECCCFISNDEFLSGSDDGSIE 782
            +IDCLRKERVLTVGRDR+M LWKVPEES+LVFRAPASSLECCCFI+NDEFLSGSDDGSIE
Sbjct: 314  SIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSGSDDGSIE 373

Query: 781  HWGVLRKKPLHIVKNAHPSLTPNKLDGGQNDDLSNGSKDNLHPTPEKLCPSAHSWVSSVA 602
             WG+LRKKP++IVKNAH +L+       QN +                C +A+SWVSSV 
Sbjct: 374  LWGMLRKKPVYIVKNAH-ALSATLRQPEQNYN----------------CSTAYSWVSSVT 416

Query: 601  VCRGSDLAASGAGNGMVRLWEIESDAKGIHPLFELPLVGYVNSLAFANSGKFLVAGVGKE 422
            VCR SDLAASGA NG VRLW I S+ K I PLF LPLVG+VNSLAF+ SG+FLVAGVG+E
Sbjct: 417  VCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQE 476

Query: 421  PRLGRWGCLPAARHGVAVHPLQLS 350
            PRLGRWG LPAAR+GVAV  L+LS
Sbjct: 477  PRLGRWGRLPAARNGVAVQSLKLS 500


>ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Cucumis
            sativus]
          Length = 494

 Score =  379 bits (974), Expect = e-103
 Identities = 191/268 (71%), Positives = 219/268 (81%), Gaps = 4/268 (1%)
 Frame = -3

Query: 1141 TRTREHIQAFPGHKGPVSCLTFRQGTSELFSGSYDRTIKIWNADDRSYITTLFGHQSDVL 962
            TRTREHIQAFPGH+GPVSCLTFRQGTSELFSGSYDRT+KIWN DDR+YI TLFGHQSDVL
Sbjct: 240  TRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVL 299

Query: 961  TIDCLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASSLECCCFISNDEFLSGSDDGSIE 782
            TIDCLRKER+LTVGRDR+M LWKVPEES+LVFRAPASSLECCCFISNDEFLSGSDDGSIE
Sbjct: 300  TIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIE 359

Query: 781  HWGVLRKKPLHIVKNAHPSLTPN-KLDGGQNDDLSN---GSKDNLHPTPEKLCPSAHSWV 614
             W  L+KKP+ IV+NAH S + +  L+  +N  + N   G+ D  H T   L  SA+SW+
Sbjct: 360  LWTALKKKPVFIVRNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNL--SAYSWI 417

Query: 613  SSVAVCRGSDLAASGAGNGMVRLWEIESDAKGIHPLFELPLVGYVNSLAFANSGKFLVAG 434
            SSV+VCR SDLAASGAGNG VRLW + SD K + PL++LPL            G+F+VAG
Sbjct: 418  SSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLF-----------GRFVVAG 466

Query: 433  VGKEPRLGRWGCLPAARHGVAVHPLQLS 350
            VG+EPRLGRWG +PAAR+GVAVHPL+LS
Sbjct: 467  VGQEPRLGRWGRIPAARNGVAVHPLKLS 494


>ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like isoform
            1 [Glycine max]
          Length = 496

 Score =  375 bits (962), Expect = e-101
 Identities = 184/265 (69%), Positives = 220/265 (83%), Gaps = 2/265 (0%)
 Frame = -3

Query: 1141 TRTREHIQAFPGHKGPVSCLTFRQGTSELFSGSYDRTIKIWNADDRSYITTLFGHQSDVL 962
            TRTREH+Q+FPGH+GPVSCLTFRQGTSELFSGS+DRTIKIWN +DR+Y++TLFGHQS+VL
Sbjct: 232  TRTREHLQSFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWNVEDRTYMSTLFGHQSEVL 291

Query: 961  TIDCLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASSLECCCFISNDEFLSGSDDGSIE 782
            +IDCLRKERVLT GRDR+M L+KV EES+LVFRAPASSLECCCF+ NDE  SGSDDGSIE
Sbjct: 292  SIDCLRKERVLTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIE 351

Query: 781  HWGVLRKKPLHIVKNAHP-SLTPNKLDGGQNDDLSNGSKDNLHPTP-EKLCPSAHSWVSS 608
             W V+RKKP++I++NAH   +   K D   ++ L NG+ +N +  P +  C S  SWVS+
Sbjct: 352  LWTVMRKKPIYILRNAHALPVDSMKSDQKDSEKLPNGNLENGYNHPKDHHCLSVFSWVSA 411

Query: 607  VAVCRGSDLAASGAGNGMVRLWEIESDAKGIHPLFELPLVGYVNSLAFANSGKFLVAGVG 428
            V+VCR SDLAASGAGNG VRLWEIESD K I  L  +PL G+VNSLAFA SG+FLVAGVG
Sbjct: 412  VSVCRNSDLAASGAGNGSVRLWEIESDTKDIKSLCNVPLAGFVNSLAFAKSGEFLVAGVG 471

Query: 427  KEPRLGRWGCLPAARHGVAVHPLQL 353
            +EPRLGRWG  P AR+GV++ PL+L
Sbjct: 472  QEPRLGRWGRNPEARNGVSILPLKL 496


>ref|XP_003594504.1| Pre-mRNA-processing factor [Medicago truncatula]
            gi|355483552|gb|AES64755.1| Pre-mRNA-processing factor
            [Medicago truncatula]
          Length = 514

 Score =  374 bits (960), Expect = e-101
 Identities = 184/276 (66%), Positives = 223/276 (80%), Gaps = 12/276 (4%)
 Frame = -3

Query: 1141 TRTREHIQAFPGHKGPVSCLTFRQGTSELFSGSYDRTIKIWNADDRSYITTLFGHQSDVL 962
            TRTREH+QAFPGH+GPVS L FR+G++ELFSGS+DRT+KIWN +DR+Y+ TLFGHQS+VL
Sbjct: 239  TRTREHLQAFPGHRGPVSSLAFREGSTELFSGSFDRTVKIWNVEDRTYMNTLFGHQSEVL 298

Query: 961  TIDCLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASSLECCCFISNDEFLSGSDDGSIE 782
            +IDCLRKERVL+ GRDR+M L+KV EES+LVFRAPASSLECCCF++N+EFLSGSDDGSIE
Sbjct: 299  SIDCLRKERVLSAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVNNEEFLSGSDDGSIE 358

Query: 781  HWGVLRKKPLHIVKNAHPSLTPN-KLDGGQNDDLSNGSKDNLHPTPEK-LCPSAHSWVSS 608
             WG +RKKP+HI++NAH  LT + K D   ++ L NG+ +N H  PE   C S HSWVS+
Sbjct: 359  LWGAVRKKPIHILRNAHALLTDSKKSDQNDSERLPNGNLENGHHHPENHHCSSVHSWVSA 418

Query: 607  VAVCRGSDLAASGAGNGMVRLWEIESDAKGIHPLFELPLVGYVNSLAFANSGKFLVAGVG 428
            V VCR SDLAASGAGNG VRLW IE++ K I PL  +PLVG+VNSLAFA S KFLVAGVG
Sbjct: 419  VTVCRNSDLAASGAGNGFVRLWTIENETKDIKPLHNVPLVGFVNSLAFAKSAKFLVAGVG 478

Query: 427  K----------EPRLGRWGCLPAARHGVAVHPLQLS 350
            +          EPRLGRWG +  AR+GV++ PL+LS
Sbjct: 479  QVLKLLNSACIEPRLGRWGRIREARNGVSILPLKLS 514