BLASTX nr result

ID: Atractylodes22_contig00022132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022132
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus ...    55   4e-06
ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542007|gb|EEF43552.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 462

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/55 (47%), Positives = 31/55 (56%)
 Frame = +2

Query: 92  NISQDHXXXXXXXXXXXXXXXXAMTCKKTTRLTHSPTLWKSICTRDWGDSTVDAL 256
           NI+QDH                 MTCK+ T LT S  LW+SIC RDWG ++VDAL
Sbjct: 31  NIAQDHLFTILLLLPIDSILSFGMTCKRFTSLTSSDALWESICKRDWGPTSVDAL 85


>ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|222851725|gb|EEE89272.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/63 (41%), Positives = 33/63 (52%)
 Frame = +2

Query: 65  GGDGASLITNISQDHXXXXXXXXXXXXXXXXAMTCKKTTRLTHSPTLWKSICTRDWGDST 244
           G   AS I  ++ DH                AMTCK+   LT S TLW+SIC R+WG ++
Sbjct: 17  GSSSASPIVKLADDHLFTIMLLLPVDSLISFAMTCKRFRSLTTSDTLWESICRREWGSTS 76

Query: 245 VDA 253
           VDA
Sbjct: 77  VDA 79


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