BLASTX nr result

ID: Atractylodes22_contig00022125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022125
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   374   e-101
emb|CBI17645.3| unnamed protein product [Vitis vinifera]              374   e-101
emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]   374   e-101
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   371   e-100
ref|XP_002325903.1| predicted membrane protein [Populus trichoca...   350   6e-94

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  374 bits (960), Expect = e-101
 Identities = 199/257 (77%), Positives = 217/257 (84%), Gaps = 3/257 (1%)
 Frame = -1

Query: 978 DSTGSIIDLGRRSKVVVQTLKNNVIGDRIDPKVV---LNLDSGLGVVDAFFASLSMILVS 808
           ++ GS++DLGRRSK+V++ L+    GD+ DP  +   L+LDSGLGV DAFFASLSMI+VS
Sbjct: 35  ETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVS 94

Query: 807 EIGDETFIIAALMAMRHPKSIVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVL 628
           EIGDETFIIAALMAMRHPKSIVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 95  EIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVL 154

Query: 627 YAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXESGQGKTAVRQFFSRFCTPIFLESFILT 448
           YAFFGLRLLYIAWRSDSKASQ           ESGQGKT+ R+FFSRFCTPIFLESFILT
Sbjct: 155 YAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILT 214

Query: 447 FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSVAVIGGSMLASKISQGTVATVX 268
           FLAEWGDRSQIATIALATHKNA+GVAVGATIGHTICTS+AV+GGSMLASKISQGTVATV 
Sbjct: 215 FLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVG 274

Query: 267 XXXXXXXXXXXXXYPPL 217
                        YPPL
Sbjct: 275 GLLFLGFSLSSYFYPPL 291


>emb|CBI17645.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  374 bits (960), Expect = e-101
 Identities = 199/257 (77%), Positives = 217/257 (84%), Gaps = 3/257 (1%)
 Frame = -1

Query: 978 DSTGSIIDLGRRSKVVVQTLKNNVIGDRIDPKVV---LNLDSGLGVVDAFFASLSMILVS 808
           ++ GS++DLGRRSK+V++ L+    GD+ DP  +   L+LDSGLGV DAFFASLSMI+VS
Sbjct: 35  ETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVS 94

Query: 807 EIGDETFIIAALMAMRHPKSIVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVL 628
           EIGDETFIIAALMAMRHPKSIVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 95  EIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVL 154

Query: 627 YAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXESGQGKTAVRQFFSRFCTPIFLESFILT 448
           YAFFGLRLLYIAWRSDSKASQ           ESGQGKT+ R+FFSRFCTPIFLESFILT
Sbjct: 155 YAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILT 214

Query: 447 FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSVAVIGGSMLASKISQGTVATVX 268
           FLAEWGDRSQIATIALATHKNA+GVAVGATIGHTICTS+AV+GGSMLASKISQGTVATV 
Sbjct: 215 FLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVG 274

Query: 267 XXXXXXXXXXXXXYPPL 217
                        YPPL
Sbjct: 275 GLLFLGFSLSSYFYPPL 291


>emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]
          Length = 291

 Score =  374 bits (960), Expect = e-101
 Identities = 199/257 (77%), Positives = 217/257 (84%), Gaps = 3/257 (1%)
 Frame = -1

Query: 978 DSTGSIIDLGRRSKVVVQTLKNNVIGDRIDPKVV---LNLDSGLGVVDAFFASLSMILVS 808
           ++ GS++DLGRRSK+V++ L+    GD+ DP  +   L+LDSGLGV DAFFASLSMI+VS
Sbjct: 35  ETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVS 94

Query: 807 EIGDETFIIAALMAMRHPKSIVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVL 628
           EIGDETFIIAALMAMRHPKSIVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 95  EIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVL 154

Query: 627 YAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXESGQGKTAVRQFFSRFCTPIFLESFILT 448
           YAFFGLRLLYIAWRSDSKASQ           ESGQGKT+ R+FFSRFCTPIFLESFILT
Sbjct: 155 YAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILT 214

Query: 447 FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSVAVIGGSMLASKISQGTVATVX 268
           FLAEWGDRSQIATIALATHKNA+GVAVGATIGHTICTS+AV+GGSMLASKISQGTVATV 
Sbjct: 215 FLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVG 274

Query: 267 XXXXXXXXXXXXXYPPL 217
                        YPPL
Sbjct: 275 GLLFLGFSLSSYFYPPL 291


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  371 bits (952), Expect = e-100
 Identities = 204/296 (68%), Positives = 230/296 (77%)
 Frame = -1

Query: 1086 IMNPRLNYGFVILFLFVFVTASLVSAQDVGGDKDNEDSTGSIIDLGRRSKVVVQTLKNNV 907
            + +PRL    +ILF F+ +   L++AQD   + + E+ST SI DLGRR  +V + +  N 
Sbjct: 4    VSSPRL----LILFAFLLLGLPLIAAQDSLVENEKEESTASIKDLGRRGMIVTKDIDGNS 59

Query: 906  IGDRIDPKVVLNLDSGLGVVDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGAL 727
            +       + L++DSGLGV DAF ASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGAL
Sbjct: 60   VN------LGLHVDSGLGVFDAFIASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGAL 113

Query: 726  SALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQXXXXXX 547
            +AL VMT+LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSK SQ      
Sbjct: 114  TALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKVSQKKEMEE 173

Query: 546  XXXXXESGQGKTAVRQFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAV 367
                 ESGQGKT  R+FFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA+GVAV
Sbjct: 174  VEEKLESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAV 233

Query: 366  GATIGHTICTSVAVIGGSMLASKISQGTVATVXXXXXXXXXXXXXXYPPL*RQAES 199
            GATIGHTICTS+AV+GGSMLASKISQGTVAT+              YPPL  Q+ S
Sbjct: 234  GATIGHTICTSLAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPLFLQSLS 289


>ref|XP_002325903.1| predicted membrane protein [Populus trichocarpa]
            gi|222862778|gb|EEF00285.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 284

 Score =  350 bits (897), Expect = 6e-94
 Identities = 196/290 (67%), Positives = 218/290 (75%), Gaps = 1/290 (0%)
 Frame = -1

Query: 1083 MNPRLNYGFVILFLFVFVTASLVSAQDVGGDKDNE-DSTGSIIDLGRRSKVVVQTLKNNV 907
            M  R N  F+IL +   V   L+S       ++NE D + S  DLGRR  VV        
Sbjct: 1    MGFRSNPRFIILVVAAAVLLLLLSLSHTAAAQENEGDESRSFQDLGRRGMVVRNGDDAKS 60

Query: 906  IGDRIDPKVVLNLDSGLGVVDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGAL 727
             G+       L L+SGLG+ DAFFASLSMILVSEIGDETFIIAALMAMRHPKS VLSGAL
Sbjct: 61   AGNG------LKLESGLGIFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGAL 114

Query: 726  SALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQXXXXXX 547
            +AL VMT+LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSK+SQ      
Sbjct: 115  TALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKSSQKKEMEE 174

Query: 546  XXXXXESGQGKTAVRQFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAV 367
                 E+GQGKT+ R++FSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA+GVAV
Sbjct: 175  VEEKLEAGQGKTSFRRYFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAV 234

Query: 366  GATIGHTICTSVAVIGGSMLASKISQGTVATVXXXXXXXXXXXXXXYPPL 217
            GAT+GHTICTS+AV+GGS+LASKISQGTVAT+              YPPL
Sbjct: 235  GATLGHTICTSLAVVGGSLLASKISQGTVATIGGLLFLCFSLSSYFYPPL 284


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