BLASTX nr result

ID: Atractylodes22_contig00021955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021955
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   176   1e-42
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              176   1e-42
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   160   8e-38

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/97 (83%), Positives = 89/97 (91%)
 Frame = -1

Query: 313 DRAMYALAHSRVKNKREVWESVKSQYDEEGLMNLNISQCTALTPPAVQALCDSFPALHTC 134
           D+AMY+LA SRVKNK E+WES+KS+Y EEGLMNLNISQCTALTPPAVQA+CDSFPALHTC
Sbjct: 274 DKAMYSLAQSRVKNKHEMWESMKSRYSEEGLMNLNISQCTALTPPAVQAVCDSFPALHTC 333

Query: 133 PGRHSLIISGCLNLTSVHCACTFQAHRAMAPLSHPAH 23
           PGRHSLIISGCL+LTSVHCAC  QAHR  + LSHPAH
Sbjct: 334 PGRHSLIISGCLSLTSVHCACGVQAHRTASQLSHPAH 370


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/97 (83%), Positives = 89/97 (91%)
 Frame = -1

Query: 313 DRAMYALAHSRVKNKREVWESVKSQYDEEGLMNLNISQCTALTPPAVQALCDSFPALHTC 134
           D+AMY+LA SRVKNK E+WES+KS+Y EEGLMNLNISQCTALTPPAVQA+CDSFPALHTC
Sbjct: 332 DKAMYSLAQSRVKNKHEMWESMKSRYSEEGLMNLNISQCTALTPPAVQAVCDSFPALHTC 391

Query: 133 PGRHSLIISGCLNLTSVHCACTFQAHRAMAPLSHPAH 23
           PGRHSLIISGCL+LTSVHCAC  QAHR  + LSHPAH
Sbjct: 392 PGRHSLIISGCLSLTSVHCACGVQAHRTASQLSHPAH 428


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  163 bits (412), Expect = 2e-38
 Identities = 72/97 (74%), Positives = 83/97 (85%)
 Frame = -1

Query: 313 DRAMYALAHSRVKNKREVWESVKSQYDEEGLMNLNISQCTALTPPAVQALCDSFPALHTC 134
           DRAMY+L H+RVKNK  +WES+K +YDEEGL +LNISQCTA+TPPAVQALCDSFPALHTC
Sbjct: 262 DRAMYSLVHNRVKNKPAMWESMKGRYDEEGLKSLNISQCTAITPPAVQALCDSFPALHTC 321

Query: 133 PGRHSLIISGCLNLTSVHCACTFQAHRAMAPLSHPAH 23
            GRHSL++SGC NLTSVHCAC  QAH   + + HPAH
Sbjct: 322 SGRHSLVMSGCWNLTSVHCACAVQAHHTASSIPHPAH 358


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/97 (75%), Positives = 82/97 (84%)
 Frame = -1

Query: 313 DRAMYALAHSRVKNKREVWESVKSQYDEEGLMNLNISQCTALTPPAVQALCDSFPALHTC 134
           DRAMY+L H+RVKNK  +WES+K + DEEGL  LNISQCTALTPPAVQALCDSFPALHTC
Sbjct: 267 DRAMYSLVHNRVKNKLSMWESMKGRCDEEGLSRLNISQCTALTPPAVQALCDSFPALHTC 326

Query: 133 PGRHSLIISGCLNLTSVHCACTFQAHRAMAPLSHPAH 23
            GRHSL++SGCLNLTSVHC C  QAHR+ +   HPAH
Sbjct: 327 SGRHSLVMSGCLNLTSVHCVCAVQAHRSASSFPHPAH 363


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/97 (76%), Positives = 82/97 (84%)
 Frame = -1

Query: 313 DRAMYALAHSRVKNKREVWESVKSQYDEEGLMNLNISQCTALTPPAVQALCDSFPALHTC 134
           DRAMY+L HSRVKNK  +WESVK + DEEGL +LNISQCTALTPPAVQALCD FPALHTC
Sbjct: 277 DRAMYSLVHSRVKNKPAMWESVKGRCDEEGLRSLNISQCTALTPPAVQALCDCFPALHTC 336

Query: 133 PGRHSLIISGCLNLTSVHCACTFQAHRAMAPLSHPAH 23
            GRHSL++SGCLNLTSVHCAC  QAHR    + +PAH
Sbjct: 337 SGRHSLVMSGCLNLTSVHCACAVQAHRTFRFIPNPAH 373


Top