BLASTX nr result

ID: Atractylodes22_contig00021918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021918
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311747.1| predicted protein [Populus trichocarpa] gi|2...   191   2e-57
gb|ABK94358.1| unknown [Populus trichocarpa]                          188   2e-56
ref|XP_002515037.1| Pectate lyase precursor, putative [Ricinus c...   191   8e-56
ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-55
gb|AEN70964.1| pectate lyase [Gossypium laxum] gi|345104323|gb|A...   184   3e-55

>ref|XP_002311747.1| predicted protein [Populus trichocarpa] gi|222851567|gb|EEE89114.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  191 bits (485), Expect(2) = 2e-57
 Identities = 87/96 (90%), Positives = 88/96 (91%)
 Frame = -3

Query: 289 CGTGNPIDDCWRCDKSWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSKNDDPVNPKPG 110
           CGTGNPIDDCWRCD  WEKNRQRLADCAIGFGKHAIGGRDGKIYVVTD  NDDPVNPKPG
Sbjct: 50  CGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDPGNDDPVNPKPG 109

Query: 109 TLRYGVIQNEPLWIIFAHDMTIKLKEELMMNSFKTI 2
           TLRY VIQ EPLWIIFA DM IKLKEEL+MNSFKTI
Sbjct: 110 TLRYAVIQEEPLWIIFARDMVIKLKEELIMNSFKTI 145



 Score = 56.6 bits (135), Expect(2) = 2e-57
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = -2

Query: 482 MAMPIFL-LLIGLLAPIFTLSSQVQDPKLVVQHVHRSINESRRNMGFLS 339
           MA+P+ L +L+ +LAP F   S VQDP+LVV+ VHRSIN SRR +GFLS
Sbjct: 1   MAIPLSLSILLLILAPNFISCSPVQDPELVVEEVHRSINASRRKLGFLS 49


>gb|ABK94358.1| unknown [Populus trichocarpa]
          Length = 402

 Score =  188 bits (477), Expect(2) = 2e-56
 Identities = 86/96 (89%), Positives = 87/96 (90%)
 Frame = -3

Query: 289 CGTGNPIDDCWRCDKSWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSKNDDPVNPKPG 110
           CGTGNPIDDCWRCD  WEKNRQRLADCAIGFGK AIGGRDGKIYVVTD  NDDPVNPKPG
Sbjct: 50  CGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKRAIGGRDGKIYVVTDPGNDDPVNPKPG 109

Query: 109 TLRYGVIQNEPLWIIFAHDMTIKLKEELMMNSFKTI 2
           TLRY VIQ EPLWIIFA DM IKLKEEL+MNSFKTI
Sbjct: 110 TLRYAVIQEEPLWIIFARDMVIKLKEELIMNSFKTI 145



 Score = 56.6 bits (135), Expect(2) = 2e-56
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = -2

Query: 482 MAMPIFL-LLIGLLAPIFTLSSQVQDPKLVVQHVHRSINESRRNMGFLS 339
           MA+P+ L +L+ +LAP F   S VQDP+LVV+ VHRSIN SRR +GFLS
Sbjct: 1   MAIPLSLSILLLILAPNFISCSPVQDPELVVEEVHRSINASRRKLGFLS 49


>ref|XP_002515037.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223546088|gb|EEF47591.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 404

 Score =  191 bits (486), Expect(2) = 8e-56
 Identities = 87/96 (90%), Positives = 90/96 (93%)
 Frame = -3

Query: 289 CGTGNPIDDCWRCDKSWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSKNDDPVNPKPG 110
           CGTGNPIDDCWRCD +WEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDS NDDPVNPKPG
Sbjct: 52  CGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSGNDDPVNPKPG 111

Query: 109 TLRYGVIQNEPLWIIFAHDMTIKLKEELMMNSFKTI 2
           TLR+ VIQ EPLWIIFA DM IKLKEEL+MNSFKTI
Sbjct: 112 TLRHAVIQEEPLWIIFARDMVIKLKEELIMNSFKTI 147



 Score = 50.8 bits (120), Expect(2) = 8e-56
 Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
 Frame = -2

Query: 482 MAMPIFLLLIGLL--API-FTLSSQVQDPKLVVQHVHRSINESRRNMGFLS 339
           MA+P  LL+  LL  AP     SS VQDP+LVV+ VHRSIN SRR +G+LS
Sbjct: 1   MAIPFLLLIFFLLLVAPNRIASSSPVQDPELVVEEVHRSINASRRKLGYLS 51


>ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|222869211|gb|EEF06342.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  188 bits (477), Expect(2) = 1e-55
 Identities = 85/96 (88%), Positives = 91/96 (94%)
 Frame = -3

Query: 289 CGTGNPIDDCWRCDKSWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSKNDDPVNPKPG 110
           CGTGNPIDDCWRCD +WEKNRQRLADCAIGFGK+AIGGRDGKIYVVTDS NDDPVNP+PG
Sbjct: 51  CGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGNDDPVNPRPG 110

Query: 109 TLRYGVIQNEPLWIIFAHDMTIKLKEELMMNSFKTI 2
           TLR+ VIQ EPLWIIFA DMTI+LKEEL+MNSFKTI
Sbjct: 111 TLRHAVIQEEPLWIIFARDMTIQLKEELIMNSFKTI 146



 Score = 53.9 bits (128), Expect(2) = 1e-55
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -2

Query: 464 LLLIGLLAPIFTLSSQVQDPKLVVQHVHRSINESRRNMGFLS 339
           L L+ LL P    SS VQDP+LVVQ VHR+IN SRR +G+LS
Sbjct: 9   LFLLSLLTPALISSSPVQDPELVVQEVHRAINASRRKLGYLS 50


>gb|AEN70964.1| pectate lyase [Gossypium laxum] gi|345104323|gb|AEN70983.1| pectate
           lyase [Gossypium aridum]
          Length = 411

 Score =  184 bits (467), Expect(2) = 3e-55
 Identities = 83/96 (86%), Positives = 91/96 (94%)
 Frame = -3

Query: 289 CGTGNPIDDCWRCDKSWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSKNDDPVNPKPG 110
           CGTGNPIDDCWRCD +WE NRQ+LADCAIGFGK+AIGGRDGKIYVVTDS +DDPVNPKPG
Sbjct: 59  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 118

Query: 109 TLRYGVIQNEPLWIIFAHDMTIKLKEELMMNSFKTI 2
           TLR+ VIQ+EPLWIIFA DMTI+LKEEL+MNSFKTI
Sbjct: 119 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTI 154



 Score = 56.2 bits (134), Expect(2) = 3e-55
 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
 Frame = -2

Query: 482 MAMP----IFLLLIGLLAPIFTLSSQVQDPKLVVQHVHRSINESRRNMGFLS 339
           MA+P    +FL    LL P+   SS VQDP+LVVQ VHR+IN SRRN+G+LS
Sbjct: 7   MAIPSLPLLFLFTFLLLLPLLISSSPVQDPELVVQDVHRAINASRRNLGYLS 58


Top