BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021880
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   380   e-103
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   337   5e-90
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   320   6e-85
ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arab...   315   1e-83

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  380 bits (976), Expect = e-103
 Identities = 188/364 (51%), Positives = 255/364 (70%), Gaps = 2/364 (0%)
 Frame = -3

Query: 1132 ICSENGQISGKVLVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANE 953
            I  ++GQ+ G+VLVY++PGLHFGDIHVLNA YVE LE ++GNAKYAIFF  KG RS+A+E
Sbjct: 569  IILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADE 628

Query: 952  IANGDFDGDLYWVSRNPQLLAHFKACEPWKRSYSTPSAINKKPSDFSSEELEHELLKMLF 773
            +AN DFDGD+YWVSRN QLL +F+A EPW R  ST    +K+P+DFS +ELEHEL ++  
Sbjct: 629  MANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFL 688

Query: 772  SAKTHNMAA-GIAADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXDALDAAKSGK 596
            + +    +A G+AAD+W+ FMDR + L+DD +DEK               DALDA KSG 
Sbjct: 689  TTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGM 748

Query: 595  KVVIPHALRATHFPHHMGRKPEYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYFDI-SI 419
            KV +   L+A  FPH MGR+  YHSTS+LG IYD  +S + E    +EIW LP F+I ++
Sbjct: 749  KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAV 808

Query: 418  PSSCLNLWKERYEAYRREMSNALRYNDQSKNHAANTVIIKYKQMLYGASDFKDSTRNVED 239
            P +CL  WK+RY+ YR EM+ AL++  ++K+  A  VI KYKQ+LYGA++F++S RN+ED
Sbjct: 809  PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLED 868

Query: 238  IYDEALAIYHVSYDYARSRKDVAKCGFAWKVAGSALCAYHRKIHCMKTGEREITFVSSSF 59
            I+DEALAIYHV+Y++  +   V+ C F W+VAG ALC    K++ +K GE+ +  V S  
Sbjct: 869  IFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALC----KLYTVKLGEKSMVCVPSVL 924

Query: 58   DGIF 47
              +F
Sbjct: 925  RQVF 928


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  380 bits (976), Expect = e-103
 Identities = 188/364 (51%), Positives = 255/364 (70%), Gaps = 2/364 (0%)
 Frame = -3

Query: 1132 ICSENGQISGKVLVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANE 953
            I  ++GQ+ G+VLVY++PGLHFGDIHVLNA YVE LE ++GNAKYAIFF  KG RS+A+E
Sbjct: 583  IILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADE 642

Query: 952  IANGDFDGDLYWVSRNPQLLAHFKACEPWKRSYSTPSAINKKPSDFSSEELEHELLKMLF 773
            +AN DFDGD+YWVSRN QLL +F+A EPW R  ST    +K+P+DFS +ELEHEL ++  
Sbjct: 643  MANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFL 702

Query: 772  SAKTHNMAA-GIAADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXDALDAAKSGK 596
            + +    +A G+AAD+W+ FMDR + L+DD +DEK               DALDA KSG 
Sbjct: 703  TTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGM 762

Query: 595  KVVIPHALRATHFPHHMGRKPEYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYFDI-SI 419
            KV +   L+A  FPH MGR+  YHSTS+LG IYD  +S + E    +EIW LP F+I ++
Sbjct: 763  KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAV 822

Query: 418  PSSCLNLWKERYEAYRREMSNALRYNDQSKNHAANTVIIKYKQMLYGASDFKDSTRNVED 239
            P +CL  WK+RY+ YR EM+ AL++  ++K+  A  VI KYKQ+LYGA++F++S RN+ED
Sbjct: 823  PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLED 882

Query: 238  IYDEALAIYHVSYDYARSRKDVAKCGFAWKVAGSALCAYHRKIHCMKTGEREITFVSSSF 59
            I+DEALAIYHV+Y++  +   V+ C F W+VAG ALC    K++ +K GE+ +  V S  
Sbjct: 883  IFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALC----KLYTVKLGEKSMVCVPSVL 938

Query: 58   DGIF 47
              +F
Sbjct: 939  RQVF 942


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  337 bits (863), Expect = 5e-90
 Identities = 180/356 (50%), Positives = 239/356 (67%), Gaps = 9/356 (2%)
 Frame = -3

Query: 1120 NGQISGKVLVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANEIANG 941
            NGQI+GKVLVYRNPGLHFGDIHVL A+YVE+L   +GNAKYAIFFS+KG RSVA+EIA G
Sbjct: 701  NGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGG 760

Query: 940  DFDGDLYWVSRNPQLLAHFKACEPWKRSYSTPSAINKKPSDFSSEELEHELLKMLFSAKT 761
            DFDGD+YWVSRN QLL +F+ CEPW+ S ST    NKKP +FS++ELE+EL K+  S + 
Sbjct: 761  DFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRF 820

Query: 760  H-NMAAGIAADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXDALDA-AKSGKKVV 587
              + A  +AAD+W+A MD++++L ++  +E++              DALDA  K GKK+ 
Sbjct: 821  QPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIE 880

Query: 586  IPHALRATHFPHHMGR-KPEYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYFDISIPSS 410
            +P  L+A   PH M R K  Y STS+LG I+D   +   E++P  E+  LP F+  +P  
Sbjct: 881  VPKHLKAGTLPHFMERGKNSYVSTSILGQIFD-TANMYQEEVPNIEVQKLPCFEEELPEY 939

Query: 409  CLNLWKERYEAYRREMSNALRYNDQSKNHAANTVIIKYKQMLYGASDFKDSTRNVEDIYD 230
                WK  YE YR++M +A++ +  +KN AA   I KYK++LYGA + + S R+ E++Y 
Sbjct: 940  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVYQ 999

Query: 229  EALAIYHVSYDYARSRKDVAKCGFAWKVAGSALCAYH------RKIHCMKTGEREI 80
            EALAIY V+YD+A SR  V  CGFAWKVAGSAL   +      R  HC+ +  REI
Sbjct: 1000 EALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREI 1054


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 953

 Score =  320 bits (819), Expect = 6e-85
 Identities = 169/366 (46%), Positives = 236/366 (64%), Gaps = 4/366 (1%)
 Frame = -3

Query: 1132 ICSENGQISGKVLVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANE 953
            I  EN QI G VLVYRNPGLHFGDIH ++A YV+ELE Y+G++KY IFF   G RSVA+E
Sbjct: 591  IIHENSQIVGDVLVYRNPGLHFGDIHKMDATYVKELESYVGHSKYGIFFPRVGTRSVADE 650

Query: 952  IANGDFDGDLYWVSRNPQLLAHFKACEPWKRSYSTPSAINKKPSDFSSEELEHELLKMLF 773
            IA GDFDGD YWVS +PQLL +F+  +PW  +     +  KKPS+FS EELE EL ++  
Sbjct: 651  IAGGDFDGDTYWVSNHPQLLQYFRKGDPWIENSVPLDSSVKKPSEFSPEELEEELFRLFL 710

Query: 772  SAKTH-NMAAGIAADSWMAFMDRYMILQD-DDADEKHXXXXXXXXXXXXXXDALDAAKSG 599
              +   + A G++ +SWMA MDR + L +  + +EK               +ALDA KSG
Sbjct: 711  KTRFQPSYAMGMSENSWMALMDRLLTLNNCTNENEKERVKENMLKLIDIYYEALDAPKSG 770

Query: 598  KKVVIPHALRATHFPHHMGRKPEYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYFDISI 419
            +KV +P+ L A  FPH+M +   + STS+LGLIYD  +      + + EIW LP FD+ +
Sbjct: 771  RKVQVPNDLIAELFPHYMEKDKSFTSTSILGLIYDEVEIWLENDM-VGEIWKLPCFDVEV 829

Query: 418  PSSCLNLWKERYEAYRREMSNALRYNDQSKNH-AANTVIIKYKQMLYGAS-DFKDSTRNV 245
            P SCL  WK +YE YR++M++AL   D+SK+H  A  V  KYK+  YG + + +   +++
Sbjct: 830  PPSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCLKSI 889

Query: 244  EDIYDEALAIYHVSYDYARSRKDVAKCGFAWKVAGSALCAYHRKIHCMKTGEREITFVSS 65
             DI++EALA+Y+VSY+YA  +K+V +CGFAWK+AGSAL     +++ +K  E+ +    S
Sbjct: 890  GDIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSAL----TRLYIIKQNEKALNCDPS 945

Query: 64   SFDGIF 47
                IF
Sbjct: 946  VVREIF 951


>ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
            gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 3;
            Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
            3 gi|330251848|gb|AEC06942.1| RNA-dependent RNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 992

 Score =  315 bits (808), Expect = 1e-83
 Identities = 177/359 (49%), Positives = 230/359 (64%), Gaps = 7/359 (1%)
 Frame = -3

Query: 1120 NGQISGKVLVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANEIANG 941
            +GQISG VLVYRNPGLHFGDIHVL A YV+ LE Y+GNAK+A+FF  KG RS+ +EIA G
Sbjct: 633  SGQISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGG 692

Query: 940  DFDGDLYWVSRNPQLLAHFKACEPWKRSYSTPSAI--NKKPSDFSSEELEHELLKMLFSA 767
            DFDGD+Y++SRNP+LL HFK  EPW  S S PS I   +KPS+ S EELE EL KM   A
Sbjct: 693  DFDGDMYFISRNPKLLEHFKPSEPWVSS-SKPSKIYCGRKPSELSEEELEEELFKMFLKA 751

Query: 766  K-THNMAAGIAADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXDALDAAKSGKKV 590
            +       G+AAD W+  MD ++ L D+ A EK+              DALDA K G KV
Sbjct: 752  RFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKV 811

Query: 589  VIPHALRATHFPHHMGRKP--EYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYF-DISI 419
             +P  L   +FPH+M R P  ++ STS+LGLI+D   S   E+ P  EI  L YF D  +
Sbjct: 812  DLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPSEISKLWYFEDEPV 871

Query: 418  PSSCLNLWKERYEAYRREMSNALRYNDQSK-NHAANTVIIKYKQMLYGASDFKDSTRNVE 242
            P S ++ +   YE YR EMS A+   D+ K N   N VI +YKQ  YGA+ F+DS +++E
Sbjct: 872  PKSHMDKFTSWYENYRSEMSQAMMETDKVKRNQLTNEVIQRYKQDFYGAAGFEDSNKSLE 931

Query: 241  DIYDEALAIYHVSYDYARSRKDVAKCGFAWKVAGSALCAYHRKIHCMKTGEREITFVSS 65
            ++Y +ALA+Y+V YDYA  ++ VAKC FAW VAG  LC ++ K    KT ++ +   +S
Sbjct: 932  ELYPQALALYNVVYDYA-IQEGVAKCTFAWNVAGPVLCKFYLK----KTKDKSVVASTS 985