BLASTX nr result

ID: Atractylodes22_contig00021761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021761
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   292   5e-77
ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   259   5e-67
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   246   3e-63
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar...   244   1e-62

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
            [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
            protein product [Vitis vinifera]
          Length = 727

 Score =  292 bits (747), Expect = 5e-77
 Identities = 135/182 (74%), Positives = 157/182 (86%)
 Frame = -2

Query: 692  AKRVLELDPYHDGAHILLSNIYAKERRWENVGEMRKLMQHKGVVKQRGCSRIEVDGEIHE 513
            AKR+LELDP HDGAH+ LSNIYAK RRWE+VG++RKLM+HKG+ K+RGCSR E++ EIHE
Sbjct: 547  AKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHE 606

Query: 512  FLTADKNHAEADEIYGKLDEVVSELEVGGYTPNMCSVLVDLDEEEKTKALSWHSEKLALC 333
            FL AD++H  ADEIY KL EVVS+L++ GY+PN CS+LVDL+EEEK + + WHSEKLALC
Sbjct: 607  FLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALC 666

Query: 332  YGLLRQKKRGCCIRIIKNLRVCEDCHNFMKLASKFYETEIVVRDRTRFHHYKDGACSCKD 153
            YGL+R    G CIRIIKNLRVCEDCH F+KLASK YE EIVVRDRTRFHHYKDG CSCKD
Sbjct: 667  YGLMRD-GTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKD 725

Query: 152  YW 147
            YW
Sbjct: 726  YW 727


>ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|222864804|gb|EEF01935.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  264 bits (674), Expect = 1e-68
 Identities = 121/182 (66%), Positives = 151/182 (82%)
 Frame = -2

Query: 692 AKRVLELDPYHDGAHILLSNIYAKERRWENVGEMRKLMQHKGVVKQRGCSRIEVDGEIHE 513
           AK+VLEL+P HDGA + LSNIYAK+RRW++VGE+R LM+ +G+ K+RGCSRIE++ +++E
Sbjct: 272 AKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYE 331

Query: 512 FLTADKNHAEADEIYGKLDEVVSELEVGGYTPNMCSVLVDLDEEEKTKALSWHSEKLALC 333
           F+ ADK H +AD+IY KLDEVV EL++ GYTPN  SVLVD++EE K + + WHSEKLALC
Sbjct: 332 FVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALC 391

Query: 332 YGLLRQKKRGCCIRIIKNLRVCEDCHNFMKLASKFYETEIVVRDRTRFHHYKDGACSCKD 153
           YGL+ + K G CIRI+KNLRVCEDCH F+KL SK Y  EI+VRDRTRFHHYK G CSC D
Sbjct: 392 YGLMGEGK-GSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCND 450

Query: 152 YW 147
           YW
Sbjct: 451 YW 452


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
            [Glycine max]
          Length = 721

 Score =  259 bits (661), Expect = 5e-67
 Identities = 116/182 (63%), Positives = 151/182 (82%)
 Frame = -2

Query: 692  AKRVLELDPYHDGAHILLSNIYAKERRWENVGEMRKLMQHKGVVKQRGCSRIEVDGEIHE 513
            A R+LEL+P HDGA ++LSNIYAKE+RW++VG +RKLM+HKGV K++ CSRIEV+ E+H 
Sbjct: 541  ATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHV 600

Query: 512  FLTADKNHAEADEIYGKLDEVVSELEVGGYTPNMCSVLVDLDEEEKTKALSWHSEKLALC 333
            F+ AD+ H ++DEIY KLD VVS+L++ GYTP+   +LVDL+EEEK + + WHSEKLALC
Sbjct: 601  FMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALC 660

Query: 332  YGLLRQKKRGCCIRIIKNLRVCEDCHNFMKLASKFYETEIVVRDRTRFHHYKDGACSCKD 153
            YGL+ ++K   CIRI+KNLR+CEDCH+FMKL SK +  EIV+RDRTRFHH+  G CSC+D
Sbjct: 661  YGLIGERKES-CIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRD 719

Query: 152  YW 147
            YW
Sbjct: 720  YW 721


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512069|gb|AES93692.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  246 bits (628), Expect = 3e-63
 Identities = 109/182 (59%), Positives = 147/182 (80%)
 Frame = -2

Query: 692  AKRVLELDPYHDGAHILLSNIYAKERRWENVGEMRKLMQHKGVVKQRGCSRIEVDGEIHE 513
            AKR+LEL+P HDGA ++LSNIYAKE+RW +VG +RK M +KG+ K++  SRIE++ ++H 
Sbjct: 546  AKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHM 605

Query: 512  FLTADKNHAEADEIYGKLDEVVSELEVGGYTPNMCSVLVDLDEEEKTKALSWHSEKLALC 333
            F+ AD+ H ++DEIY KLDEVVS+L++ GY P+   +L+DL+EE+K + + WHSEKLA+C
Sbjct: 606  FMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVC 665

Query: 332  YGLLRQKKRGCCIRIIKNLRVCEDCHNFMKLASKFYETEIVVRDRTRFHHYKDGACSCKD 153
            YGL+ ++    CIRI+KNLR+CEDCH+FMKL SK Y+ EIVVRDRTRFHH   G CSC+D
Sbjct: 666  YGLISRRNES-CIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRD 724

Query: 152  YW 147
            YW
Sbjct: 725  YW 726


>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75274931|sp|O23337.1|PP311_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g14820 gi|2244839|emb|CAB10261.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268228|emb|CAB78524.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332658106|gb|AEE83506.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  244 bits (623), Expect = 1e-62
 Identities = 114/187 (60%), Positives = 149/187 (79%), Gaps = 5/187 (2%)
 Frame = -2

Query: 692  AKRVLELDPYHDGAHILLSNIYAKERRWENVGEMRKLMQHKGVVKQRGCSRIEVDGEIHE 513
            AKR+LEL+P HDGA +L+SNIYA+E+RWE+V  +R++M+ K V K++G SRI+ +G+ HE
Sbjct: 536  AKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHE 595

Query: 512  FLTADKNHAEADEIYGKLDEVVSELEVGGYTPNMCSVLVDLDEEEKTKALSWHSEKLALC 333
            FL  DK H +++EIY KLDEVVS+L++ GY P+  SVLVD++EEEK   + WHSEKLALC
Sbjct: 596  FLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALC 655

Query: 332  YGLLRQKK---RGCC--IRIIKNLRVCEDCHNFMKLASKFYETEIVVRDRTRFHHYKDGA 168
            +GL+ ++K   +  C  IRI+KNLRVCEDCH F KL SK YE EI+VRDRTRFH YK+G 
Sbjct: 656  FGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGL 715

Query: 167  CSCKDYW 147
            CSC+DYW
Sbjct: 716  CSCRDYW 722


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