BLASTX nr result

ID: Atractylodes22_contig00021707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021707
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   248   1e-63
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   248   1e-63
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,...   239   5e-61
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   235   1e-59
ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ...   234   2e-59

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  248 bits (634), Expect = 1e-63
 Identities = 112/159 (70%), Positives = 131/159 (82%)
 Frame = +3

Query: 3   GVTPSATTYNCFFKEYRGRKDVDGAFRLYKKIKEDSVSLPNTHTYNILMGMFTRLNRFDL 182
           GV+PSA TYNCFFKEYRGRKD D A RLY+K+KE+   LP+ HTYNIL+GMF +LNR ++
Sbjct: 367 GVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEI 426

Query: 183 AKEIWDDMKGSGCGPDLDSYTLLVHDLCEKQKWREACEYFVEMIEKGILPQKVTFETLYK 362
            +EIWDDMK SG GPDLDSYTLL+H LCEKQKW+EAC +FVEMIEKG LPQK+TFETLY+
Sbjct: 427 VQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYR 486

Query: 363 GLIQSDMLRTWRRLKKKLDDXXXXXXXXXXNYHIKPYKR 479
           GLIQSDML+TWRRLKKKL++           YH KPY+R
Sbjct: 487 GLIQSDMLKTWRRLKKKLEEESITFGSEFQQYHFKPYRR 525


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  248 bits (633), Expect = 1e-63
 Identities = 112/159 (70%), Positives = 131/159 (82%)
 Frame = +3

Query: 3   GVTPSATTYNCFFKEYRGRKDVDGAFRLYKKIKEDSVSLPNTHTYNILMGMFTRLNRFDL 182
           GV+PSA TYNCFFKEYRGRKD D A RLY+K+KE+   LP+ HTYNIL+GMF +LNR ++
Sbjct: 367 GVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEI 426

Query: 183 AKEIWDDMKGSGCGPDLDSYTLLVHDLCEKQKWREACEYFVEMIEKGILPQKVTFETLYK 362
            +EIWDDMK SG GPDLDSYTLL+H LCEKQKW+EAC +FVEMIEKG LPQK+TFETLY+
Sbjct: 427 VQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYR 486

Query: 363 GLIQSDMLRTWRRLKKKLDDXXXXXXXXXXNYHIKPYKR 479
           GLIQSDML+TWRRLKKKL++           YH KPY+R
Sbjct: 487 GLIQSDMLKTWRRLKKKLEEESITFGSEFQXYHFKPYRR 525


>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 511

 Score =  239 bits (611), Expect = 5e-61
 Identities = 106/159 (66%), Positives = 133/159 (83%)
 Frame = +3

Query: 3   GVTPSATTYNCFFKEYRGRKDVDGAFRLYKKIKEDSVSLPNTHTYNILMGMFTRLNRFDL 182
           GV+P+A TYNCFFKEYRGRKD + A +LY+KI+++++  P+ HTYNIL+GMF +LNRF++
Sbjct: 353 GVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNI 412

Query: 183 AKEIWDDMKGSGCGPDLDSYTLLVHDLCEKQKWREACEYFVEMIEKGILPQKVTFETLYK 362
             EIW+D++ SG GPDLDSYTLLVH LCEKQKW++AC++FVEMIEKG+LPQK TFE LY 
Sbjct: 413 VNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYA 472

Query: 363 GLIQSDMLRTWRRLKKKLDDXXXXXXXXXXNYHIKPYKR 479
           GLIQS+MLRTWRRLKKKLD+          NYH+KPY+R
Sbjct: 473 GLIQSNMLRTWRRLKKKLDEESIAFGSEFSNYHLKPYRR 511


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  235 bits (599), Expect = 1e-59
 Identities = 106/159 (66%), Positives = 127/159 (79%)
 Frame = +3

Query: 3   GVTPSATTYNCFFKEYRGRKDVDGAFRLYKKIKEDSVSLPNTHTYNILMGMFTRLNRFDL 182
           GV+ +A TYNCFFKEY GRKD + A +LYKK++ED +     H+YNIL+ MF  LNR D+
Sbjct: 390 GVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDI 449

Query: 183 AKEIWDDMKGSGCGPDLDSYTLLVHDLCEKQKWREACEYFVEMIEKGILPQKVTFETLYK 362
             EIW+D+K SG GPDLDSYT+L+H LCEK+KWREAC++FVEMIEKG+LPQKVTFETLYK
Sbjct: 450 VNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYK 509

Query: 363 GLIQSDMLRTWRRLKKKLDDXXXXXXXXXXNYHIKPYKR 479
           GLIQSDMLRTWRRLKKKLD+          NY +KPY+R
Sbjct: 510 GLIQSDMLRTWRRLKKKLDEESITFGSEFQNYQLKPYRR 548


>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487251|gb|AES68454.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 503

 Score =  234 bits (598), Expect = 2e-59
 Identities = 106/159 (66%), Positives = 124/159 (77%)
 Frame = +3

Query: 3   GVTPSATTYNCFFKEYRGRKDVDGAFRLYKKIKEDSVSLPNTHTYNILMGMFTRLNRFDL 182
           GV+P A TYNCFFKEYRGRKD D A + +KK+KED +  P THTY +L+ MF + +   +
Sbjct: 345 GVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGV 404

Query: 183 AKEIWDDMKGSGCGPDLDSYTLLVHDLCEKQKWREACEYFVEMIEKGILPQKVTFETLYK 362
            KEIW+DM  SG GPDLDSYT+L+H LCE +KWREAC+YFVEMIEKG LPQKVTFETLY+
Sbjct: 405 VKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYR 464

Query: 363 GLIQSDMLRTWRRLKKKLDDXXXXXXXXXXNYHIKPYKR 479
           GLIQSDMLRTWRRLKK+LD           NYH+KPYKR
Sbjct: 465 GLIQSDMLRTWRRLKKRLDQESITFGSEFQNYHLKPYKR 503


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