BLASTX nr result

ID: Atractylodes22_contig00021643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021643
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   244   1e-62
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2...   226   3e-57
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,...   219   4e-55
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi...   218   1e-54
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi...   218   1e-54

>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score =  244 bits (622), Expect = 1e-62
 Identities = 123/208 (59%), Positives = 149/208 (71%)
 Frame = +2

Query: 62  HLSLYQFLLLAGRRISPLQQVHAQIIFSGXXXXXXXXXXXXXXACAAEAILYTRQLLFSI 241
           H   YQ LL AG R+ PLQQVHA +I SG              AC A +ILYTRQL FSI
Sbjct: 18  HSPAYQVLLHAGPRLKPLQQVHAHLIVSGSYRSRALLTKLLTLACTAGSILYTRQLFFSI 77

Query: 242 ANPDSFLFSSLIKTSTKHNFPLDSIIFYRHMLVCDAAWSNHAFTAVIKACAKLSALGLGR 421
            NPDSFLF+++IK S+K  F  D+I+FYR M+      SN+ FTAVIKACA +SAL +GR
Sbjct: 78  TNPDSFLFNAIIKASSKFGFSCDAILFYRRMVADSIPQSNYTFTAVIKACADISALRIGR 137

Query: 422 IVHCHVLVSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVAWNSMISGYEQYG 601
            +H HVLV GY  DSFVQAAL++FYAK  ++  A+KVFD MP RT++AWNSMISGY+Q G
Sbjct: 138 PIHSHVLVCGYDSDSFVQAALIAFYAKSGDVGEAKKVFDRMPERTIIAWNSMISGYDQNG 197

Query: 602 LAEEAIGLFSRMRDSGVEFDSVTVVSVL 685
            ++EA+GLF RMR+ GVEFDS T VSVL
Sbjct: 198 FSKEAVGLFYRMRELGVEFDSATFVSVL 225



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 44/133 (33%), Positives = 77/133 (57%)
 Frame = +2

Query: 263 FSSLIKTSTKHNFPLDSIIFYRHMLVCDAAWSNHAFTAVIKACAKLSALGLGRIVHCHVL 442
           ++S+I    ++ F  +++  +  M      + +  F +V+ AC++  AL LG  VH +++
Sbjct: 186 WNSMISGYDQNGFSKEAVGLFYRMRELGVEFDSATFVSVLSACSQSGALDLGCWVHDYIV 245

Query: 443 VSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVAWNSMISGYEQYGLAEEAIG 622
            + + ++  +  +L++ Y +C  +S AR+VFDEM  R +VAW +MISGY  +G   EAI 
Sbjct: 246 NNSFDVNVVLGTSLINMYTRCGNVSKAREVFDEMNERNVVAWTAMISGYGMHGYGREAIE 305

Query: 623 LFSRMRDSGVEFD 661
           LF  MR  G+  D
Sbjct: 306 LFRLMRIHGMRQD 318


>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score =  226 bits (576), Expect = 3e-57
 Identities = 119/209 (56%), Positives = 150/209 (71%), Gaps = 1/209 (0%)
 Frame = +2

Query: 62  HLSLYQFLLLAGRRISPLQQVHAQIIFSGXXXXXXXXXXXXXXACAAEAILYTRQLLFSI 241
           H   Y FLL AG R+  L QVHA II SG              ACAA +I YTRQ+  ++
Sbjct: 11  HSPAYNFLLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAV 70

Query: 242 ANPDSFLFSSLIKTSTK-HNFPLDSIIFYRHMLVCDAAWSNHAFTAVIKACAKLSALGLG 418
            NPDSFLF+SLIK+++K HNF + S+ FY  M++ + + SN+ FT+VIK+CA LSAL  G
Sbjct: 71  PNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHG 130

Query: 419 RIVHCHVLVSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVAWNSMISGYEQY 598
           R+VH HVLV G+GLD +VQAALV+ Y KC +L  ARKVFD++  R++VAWNSMISGYEQ 
Sbjct: 131 RVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQN 190

Query: 599 GLAEEAIGLFSRMRDSGVEFDSVTVVSVL 685
           G A+EAIGLF RM+++GVE DS T VSVL
Sbjct: 191 GFAKEAIGLFDRMKETGVEPDSATFVSVL 219



 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 51/159 (32%), Positives = 87/159 (54%)
 Frame = +2

Query: 209 ILYTRQLLFSIANPDSFLFSSLIKTSTKHNFPLDSIIFYRHMLVCDAAWSNHAFTAVIKA 388
           ++  R++   I       ++S+I    ++ F  ++I  +  M        +  F +V+ A
Sbjct: 162 LINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSA 221

Query: 389 CAKLSALGLGRIVHCHVLVSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVAW 568
           CA L A  LG  VH +++ +G  L+  +  +L++ Y +C  +S AR+VFD M  R +VAW
Sbjct: 222 CAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAW 281

Query: 569 NSMISGYEQYGLAEEAIGLFSRMRDSGVEFDSVTVVSVL 685
            +MISGY   G   +A+ LF  MR +G+  +S+T V+VL
Sbjct: 282 TAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVL 320


>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 386

 Score =  219 bits (558), Expect = 4e-55
 Identities = 113/209 (54%), Positives = 148/209 (70%), Gaps = 1/209 (0%)
 Frame = +2

Query: 62  HLSLYQFLLLAGRRISPLQQVHAQIIFSGXXXXXXXXXXXXXXACAAEAILYTRQLLFSI 241
           H   Y FLL AG R+ PLQQVHA +I SG              ACAA +I+YTRQ+  S+
Sbjct: 11  HSPAYHFLLQAGPRLKPLQQVHAYVIVSGSGHSRSLLTKLLNLACAAGSIIYTRQIFLSV 70

Query: 242 ANPDSFLFSSLIKTSTK-HNFPLDSIIFYRHMLVCDAAWSNHAFTAVIKACAKLSALGLG 418
           ANPDSFLF++LIK+++K H F + S+ FY  ML+ D + S + FT+++K+CA LS+L LG
Sbjct: 71  ANPDSFLFNTLIKSTSKFHKFSIYSLFFYNCMLLSDISPSAYTFTSIVKSCADLSSLKLG 130

Query: 419 RIVHCHVLVSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVAWNSMISGYEQY 598
           ++VH HVLV+G+GLD +VQAALV+ YAK  +L  ARKVFD+M  R++V+WNS+ISGYEQ 
Sbjct: 131 KVVHGHVLVNGFGLDVYVQAALVACYAKSGDLGNARKVFDKMRERSVVSWNSIISGYEQN 190

Query: 599 GLAEEAIGLFSRMRDSGVEFDSVTVVSVL 685
           G   EAI LF +MR+ G E DS T V VL
Sbjct: 191 GFGREAIRLFKKMREEGFEPDSATFVIVL 219



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 46/141 (32%), Positives = 78/141 (55%)
 Frame = +2

Query: 263 FSSLIKTSTKHNFPLDSIIFYRHMLVCDAAWSNHAFTAVIKACAKLSALGLGRIVHCHVL 442
           ++S+I    ++ F  ++I  ++ M        +  F  V+ ACA+L AL +G  VH + +
Sbjct: 180 WNSIISGYEQNGFGREAIRLFKKMREEGFEPDSATFVIVLSACAQLGALSMGCWVHKYTI 239

Query: 443 VSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVAWNSMISGYEQYGLAEEAIG 622
             G  L+  +  +L++ Y +C  ++ AR+VFD M  + +V W +MISGY   G   +A+ 
Sbjct: 240 GHGLDLNVVLGTSLINMYTRCGTVTKAREVFDSMKEKNVVTWTAMISGYGTNGHGRQAVQ 299

Query: 623 LFSRMRDSGVEFDSVTVVSVL 685
           LF  M+  G   +SVT V+VL
Sbjct: 300 LFDEMKRRGPCPNSVTFVAVL 320


>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  218 bits (554), Expect = 1e-54
 Identities = 108/220 (49%), Positives = 149/220 (67%)
 Frame = +2

Query: 26  EDPMIHHNAHHRHLSLYQFLLLAGRRISPLQQVHAQIIFSGXXXXXXXXXXXXXXACAAE 205
           + P+  +     H  +++ LL +G R+  LQQVHA II SG               C A 
Sbjct: 78  QHPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAG 137

Query: 206 AILYTRQLLFSIANPDSFLFSSLIKTSTKHNFPLDSIIFYRHMLVCDAAWSNHAFTAVIK 385
           +I Y R+L  ++ NPDSFLF SL+K ++K  F +D+++FYR ML   A  SN+ FT+VIK
Sbjct: 138 SITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIK 197

Query: 386 ACAKLSALGLGRIVHCHVLVSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVA 565
           ACA LSAL LG+ +H HV+V GYG D +VQAAL++ YAK +++ VA+KVFD MP RT++A
Sbjct: 198 ACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIA 257

Query: 566 WNSMISGYEQYGLAEEAIGLFSRMRDSGVEFDSVTVVSVL 685
           WNS+ISGY+Q GL +E+IGLF  M +SG + DS T+VS+L
Sbjct: 258 WNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLL 297



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 47/190 (24%), Positives = 95/190 (50%)
 Frame = +2

Query: 116 QQVHAQIIFSGXXXXXXXXXXXXXXACAAEAILYTRQLLFSIANPDSFLFSSLIKTSTKH 295
           +++H+ ++  G                 A  +   +++  ++       ++SLI    ++
Sbjct: 209 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN 268

Query: 296 NFPLDSIIFYRHMLVCDAAWSNHAFTAVIKACAKLSALGLGRIVHCHVLVSGYGLDSFVQ 475
             P +SI  +  M+       +    +++ +C++L AL  G  +H +   +G+ L+  + 
Sbjct: 269 GLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLG 328

Query: 476 AALVSFYAKCNELSVARKVFDEMPHRTLVAWNSMISGYEQYGLAEEAIGLFSRMRDSGVE 655
            +L++ Y +C  +S AR+VFD M  R +V W +MISGY  +G   +A+ LF+ MR  G  
Sbjct: 329 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 388

Query: 656 FDSVTVVSVL 685
            +++T V+VL
Sbjct: 389 PNNITFVAVL 398


>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  218 bits (554), Expect = 1e-54
 Identities = 108/220 (49%), Positives = 149/220 (67%)
 Frame = +2

Query: 26  EDPMIHHNAHHRHLSLYQFLLLAGRRISPLQQVHAQIIFSGXXXXXXXXXXXXXXACAAE 205
           + P+  +     H  +++ LL +G R+  LQQVHA II SG               C A 
Sbjct: 14  QHPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAG 73

Query: 206 AILYTRQLLFSIANPDSFLFSSLIKTSTKHNFPLDSIIFYRHMLVCDAAWSNHAFTAVIK 385
           +I Y R+L  ++ NPDSFLF SL+K ++K  F +D+++FYR ML   A  SN+ FT+VIK
Sbjct: 74  SITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIK 133

Query: 386 ACAKLSALGLGRIVHCHVLVSGYGLDSFVQAALVSFYAKCNELSVARKVFDEMPHRTLVA 565
           ACA LSAL LG+ +H HV+V GYG D +VQAAL++ YAK +++ VA+KVFD MP RT++A
Sbjct: 134 ACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIA 193

Query: 566 WNSMISGYEQYGLAEEAIGLFSRMRDSGVEFDSVTVVSVL 685
           WNS+ISGY+Q GL +E+IGLF  M +SG + DS T+VS+L
Sbjct: 194 WNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLL 233



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 47/190 (24%), Positives = 95/190 (50%)
 Frame = +2

Query: 116 QQVHAQIIFSGXXXXXXXXXXXXXXACAAEAILYTRQLLFSIANPDSFLFSSLIKTSTKH 295
           +++H+ ++  G                 A  +   +++  ++       ++SLI    ++
Sbjct: 145 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN 204

Query: 296 NFPLDSIIFYRHMLVCDAAWSNHAFTAVIKACAKLSALGLGRIVHCHVLVSGYGLDSFVQ 475
             P +SI  +  M+       +    +++ +C++L AL  G  +H +   +G+ L+  + 
Sbjct: 205 GLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLG 264

Query: 476 AALVSFYAKCNELSVARKVFDEMPHRTLVAWNSMISGYEQYGLAEEAIGLFSRMRDSGVE 655
            +L++ Y +C  +S AR+VFD M  R +V W +MISGY  +G   +A+ LF+ MR  G  
Sbjct: 265 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 324

Query: 656 FDSVTVVSVL 685
            +++T V+VL
Sbjct: 325 PNNITFVAVL 334


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