BLASTX nr result

ID: Atractylodes22_contig00021535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021535
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]      141   5e-32
ref|XP_003550865.1| PREDICTED: ribonuclease J-like [Glycine max]      140   1e-31
ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|3554...   140   1e-31
emb|CBI15641.3| unnamed protein product [Vitis vinifera]              139   2e-31

>ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|222858795|gb|EEE96342.1|
           predicted protein [Populus trichocarpa]
          Length = 890

 Score =  143 bits (360), Expect = 2e-32
 Identities = 77/127 (60%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
 Frame = -2

Query: 381 IVVSIEIMRPQSTESVFKETLKGKIRITTRCLWLDDGKXXXXXXXXXXXXXXSCPVKSPL 202
           +VVS+EI+RPQ+ +   +++LKGKI+ITTRCLWLD GK              SCPV  PL
Sbjct: 549 VVVSMEILRPQNLDGQVEKSLKGKIKITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPL 608

Query: 201 RHMERIVSELLRKMVRKYSGKRPEVITHAVENPAAVLADEINGKLSGVHH-GFE-TPLWR 28
            HMER VSE+LRKMVRKYSGKRPEVI  AVENPAAVL+DE+N +LSG  H GF  + L +
Sbjct: 609 THMERTVSEMLRKMVRKYSGKRPEVIAIAVENPAAVLSDELNSRLSGNSHVGFGISALRK 668

Query: 27  TVDGSPK 7
            VDG PK
Sbjct: 669 IVDGHPK 675


>ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 874

 Score =  141 bits (356), Expect = 5e-32
 Identities = 79/128 (61%), Positives = 89/128 (69%), Gaps = 3/128 (2%)
 Frame = -2

Query: 381 IVVSIEIMRPQSTESVFKETLKGKIRITTRCLWLDDGKXXXXXXXXXXXXXXSCPVKSPL 202
           IV+S+EI RP+  +   + TLKGKIRITTRCLWLD GK              SCPVKSPL
Sbjct: 546 IVISMEIFRPKILDGSAENTLKGKIRITTRCLWLDKGKLMDALYKAARAALSSCPVKSPL 605

Query: 201 RHMERIVSELLRKMVRKYSGKRPEVITHAVENPAAVLADEINGKLSGVHH---GFETPLW 31
            H+ERIVSE+LRKMVRKYSGKRPEVI  A+E PAA+LADEIN KLSG  H   G  T L 
Sbjct: 606 AHIERIVSEVLRKMVRKYSGKRPEVIAIAIEKPAAILADEINTKLSGKSHVGLGMST-LS 664

Query: 30  RTVDGSPK 7
           + VDG  K
Sbjct: 665 KAVDGHGK 672


>ref|XP_003550865.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 886

 Score =  140 bits (353), Expect = 1e-31
 Identities = 77/127 (60%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
 Frame = -2

Query: 381 IVVSIEIMRPQSTESVFKETLKGKIRITTRCLWLDDGKXXXXXXXXXXXXXXSCPVKSPL 202
           IVV++EI RPQ+ +S  + TLKGKIRITTRCLWLD GK              SCPV  PL
Sbjct: 565 IVVNMEIFRPQNLDSPVENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALASCPVSCPL 624

Query: 201 RHMERIVSELLRKMVRKYSGKRPEVITHAVENPAAVLADEINGKLSG-VHHGFETPLWRT 25
            HME+IVSE+LRKMVRKYSGKRPEVI  A+ENPAAVLA+EIN KLSG ++    + L + 
Sbjct: 625 AHMEKIVSEMLRKMVRKYSGKRPEVIAIAIENPAAVLANEINTKLSGKLNVDGMSALRKV 684

Query: 24  VDGSPKK 4
           VDG  K+
Sbjct: 685 VDGHEKE 691


>ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|355491138|gb|AES72341.1|
           Ribonuclease J [Medicago truncatula]
          Length = 959

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/107 (69%), Positives = 80/107 (74%)
 Frame = -2

Query: 381 IVVSIEIMRPQSTESVFKETLKGKIRITTRCLWLDDGKXXXXXXXXXXXXXXSCPVKSPL 202
           IVVS+EI RP++ ES+   TLKGKIRITTRCLWLD GK              SCPVKSPL
Sbjct: 557 IVVSMEIFRPKNLESLAGNTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSSCPVKSPL 616

Query: 201 RHMERIVSELLRKMVRKYSGKRPEVITHAVENPAAVLADEINGKLSG 61
            HMER VSE+LRKMVRKYSGKRPEVI  A+ENP AV ADEIN KLSG
Sbjct: 617 PHMERTVSEVLRKMVRKYSGKRPEVIAIAIENPGAVFADEINTKLSG 663


>emb|CBI15641.3| unnamed protein product [Vitis vinifera]
          Length = 1659

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/129 (58%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
 Frame = -2

Query: 381  IVVSIEIMRPQSTESVFKETLKGKIRITTRCLWLDDGKXXXXXXXXXXXXXXSCPVKSPL 202
            IV+S+EI+RPQ  + V +++LKGKIRITTRCLWLD GK              SCPV  PL
Sbjct: 1319 IVISMEILRPQVVDGVTEKSLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPL 1378

Query: 201  RHMERIVSELLRKMVRKYSGKRPEVITHAVENPAAVLADEINGKLSGVHH-GF-ETPLWR 28
             HMER VSE+LRKMVRKYS KRPEVI  A+ENP+AVLA E+N +LSG  H GF  + L  
Sbjct: 1379 AHMERTVSEVLRKMVRKYSSKRPEVIAIAIENPSAVLAGELNARLSGKSHVGFGASALRE 1438

Query: 27   TVDGSPKKK 1
             VD  PKK+
Sbjct: 1439 VVDEYPKKR 1447


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