BLASTX nr result

ID: Atractylodes22_contig00021511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021511
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26931.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_003536639.1| PREDICTED: uncharacterized protein LOC100792...    67   2e-09
gb|ACU20170.1| unknown [Glycine max]                                   64   1e-08
ref|XP_002301720.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002333030.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>emb|CBI26931.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = -3

Query: 366 STSRSVLCFRSVAAIFVVLLFLRHALPVVANGAVNYSFPMFMLWFLRTS 220
           STSRS++C RSVA IF+VLL LRH LPV+ NGA  Y+FP+FML  LRT+
Sbjct: 178 STSRSMMCCRSVAIIFMVLLILRHTLPVMINGAEEYTFPLFMLVLLRTA 226


>ref|XP_003536639.1| PREDICTED: uncharacterized protein LOC100792304 [Glycine max]
          Length = 271

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = -3

Query: 366 STSRSVLCFRSVAAIFVVLLFLRHALPVVANGAVNYSFPMFMLWFLRTSXXXXXXXXXXX 187
           S + S++C RS+A IF+VLL LRH LP+V +G   YSFP+F+L   RT+           
Sbjct: 168 SATGSLICCRSIAVIFMVLLILRHTLPLVISGNKEYSFPLFLLMLFRTAGVVLPIYFMVR 227

Query: 186 XXXALIHRRRQXXXXXXXXXXXXSIEGEASPTPSQHQPHIARV 58
               +   RRQ              E E +   SQ QPH+  V
Sbjct: 228 AVALIQRHRRQNREHLNASASSSDDESEQADLQSQPQPHVIHV 270


>gb|ACU20170.1| unknown [Glycine max]
          Length = 198

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/103 (34%), Positives = 49/103 (47%)
 Frame = -3

Query: 366 STSRSVLCFRSVAAIFVVLLFLRHALPVVANGAVNYSFPMFMLWFLRTSXXXXXXXXXXX 187
           S + S++C RS+A IF+VLL LRH LP+V +G   YSFP+F+L   R +           
Sbjct: 95  SATGSLICCRSIAVIFMVLLILRHTLPLVISGNKEYSFPLFLLLLFRIAGVVLPIYFMVR 154

Query: 186 XXXALIHRRRQXXXXXXXXXXXXSIEGEASPTPSQHQPHIARV 58
               +   RRQ              E E +    Q QPH+ RV
Sbjct: 155 AVALIQRHRRQHREHLNASASSPDDESEQADLQPQPQPHVIRV 197


>ref|XP_002301720.1| predicted protein [Populus trichocarpa] gi|222843446|gb|EEE80993.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 41/68 (60%)
 Frame = -3

Query: 357 RSVLCFRSVAAIFVVLLFLRHALPVVANGAVNYSFPMFMLWFLRTSXXXXXXXXXXXXXX 178
           RSV+C R VA IF+VLL LRH LP++ +GA +YS  +FML  LRT               
Sbjct: 157 RSVMCCRIVAIIFMVLLVLRHTLPIIISGAGDYSMTLFMLMILRTVGILLPIYVMVRAFT 216

Query: 177 ALIHRRRQ 154
           A+ HRRRQ
Sbjct: 217 AIQHRRRQ 224


>ref|XP_002333030.1| predicted protein [Populus trichocarpa] gi|222834466|gb|EEE72943.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 41/68 (60%)
 Frame = -3

Query: 357 RSVLCFRSVAAIFVVLLFLRHALPVVANGAVNYSFPMFMLWFLRTSXXXXXXXXXXXXXX 178
           RSV+C R VA IF+VLL LRH LP++ +GA +YS  +FML  LRT               
Sbjct: 150 RSVMCCRIVAIIFMVLLVLRHTLPIIISGAGDYSMTLFMLMILRTVGILLPIYVMVRAFT 209

Query: 177 ALIHRRRQ 154
           A+ HRRRQ
Sbjct: 210 AIQHRRRQ 217


Top