BLASTX nr result

ID: Atractylodes22_contig00021504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021504
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   105   3e-21
emb|CAN75137.1| hypothetical protein VITISV_040754 [Vitis vinifera]   105   3e-21
ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    96   3e-18
emb|CAB40577.1| SINA1p [Vitis vinifera]                                96   3e-18
emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]                  95   7e-18

>ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Vitis vinifera]
          Length = 327

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/78 (66%), Positives = 57/78 (73%), Gaps = 11/78 (14%)
 Frame = -1

Query: 202 MDLDNIECVSSSDGIEDEEIH-----------SQITHQFSSKSHNNMGMPPGLPPATSVH 56
           MDLDNIECVSSSDG+E+EEIH           + + HQFSSK   N  +PP   PATSVH
Sbjct: 1   MDLDNIECVSSSDGMEEEEIHHLHHHHHNLNHNHVVHQFSSKPLQNGVVPPATAPATSVH 60

Query: 55  ELLECPVCTNSMYPPIHQ 2
           ELLECPVCTNSMYPPIHQ
Sbjct: 61  ELLECPVCTNSMYPPIHQ 78


>emb|CAN75137.1| hypothetical protein VITISV_040754 [Vitis vinifera]
          Length = 327

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/78 (66%), Positives = 57/78 (73%), Gaps = 11/78 (14%)
 Frame = -1

Query: 202 MDLDNIECVSSSDGIEDEEIH-----------SQITHQFSSKSHNNMGMPPGLPPATSVH 56
           MDLDNIECVSSSDG+E+EEIH           + + HQFSSK   N  +PP   PATSVH
Sbjct: 1   MDLDNIECVSSSDGMEEEEIHHLHHHHHNLNHNHVVHQFSSKPLQNGVVPPAXAPATSVH 60

Query: 55  ELLECPVCTNSMYPPIHQ 2
           ELLECPVCTNSMYPPIHQ
Sbjct: 61  ELLECPVCTNSMYPPIHQ 78


>ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|297742353|emb|CBI34502.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/69 (69%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
 Frame = -1

Query: 202 MDLDNIECVSSSDGIEDEEIHSQITHQFSSKS--HNNMGMPPGLPPATSVHELLECPVCT 29
           M++D+IECVSS+DGI +EEIH    HQFSS S  H+N+ + P + PATSVHELLECPVCT
Sbjct: 1   MEIDSIECVSSTDGIYEEEIHHH-HHQFSSSSKPHSNV-VSPAISPATSVHELLECPVCT 58

Query: 28  NSMYPPIHQ 2
           NSMYPPIHQ
Sbjct: 59  NSMYPPIHQ 67


>emb|CAB40577.1| SINA1p [Vitis vinifera]
          Length = 315

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/69 (69%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
 Frame = -1

Query: 202 MDLDNIECVSSSDGIEDEEIHSQITHQFSSKS--HNNMGMPPGLPPATSVHELLECPVCT 29
           M++D+IECVSS+DGI +EEIH    HQFSS S  H+N+ + P + PATSVHELLECPVCT
Sbjct: 1   MEIDSIECVSSTDGIYEEEIHHH-HHQFSSSSKPHSNV-VSPAISPATSVHELLECPVCT 58

Query: 28  NSMYPPIHQ 2
           NSMYPPIHQ
Sbjct: 59  NSMYPPIHQ 67


>emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]
          Length = 324

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 8/75 (10%)
 Frame = -1

Query: 202 MDLDNIECVSSSDGIEDEEIHSQITHQFSSK-------SHNNMGM-PPGLPPATSVHELL 47
           MDLD+IECVSSSDG++++EIH+    +FSS        ++NN  M P  + PATSVHELL
Sbjct: 1   MDLDSIECVSSSDGMDEDEIHAHHHSEFSSTKARNGGGNNNNAAMGPTAITPATSVHELL 60

Query: 46  ECPVCTNSMYPPIHQ 2
           ECPVCTNSMYPPIHQ
Sbjct: 61  ECPVCTNSMYPPIHQ 75


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