BLASTX nr result

ID: Atractylodes22_contig00021484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021484
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]          75   5e-12
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]    70   1e-10

>gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -1

Query: 152 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSAAAEYANGFRHDH 3
           M SK +  WPKQ+T+SLVEQLI+AE+++ K +++FDSA  EY+NGFRHDH
Sbjct: 1   MASKTLFKWPKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDH 50


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = -1

Query: 152 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSAAAEYANGFRHDH 3
           M SK +  WPKQ+T+SLV QLI+AE++V KAV +FDSA AEY NGFRHDH
Sbjct: 1   MGSKTLFKWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDH 50


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = -1

Query: 152 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSAAAEYANGFRHDH 3
           M  K ++ W KQ+T S VEQL+RAER++ KA I+FDSA+AEY+NGFRHDH
Sbjct: 1   MGMKTLLKWSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDH 50


>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/50 (60%), Positives = 40/50 (80%)
 Frame = -1

Query: 152 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSAAAEYANGFRHDH 3
           M SK +I W KQ+ S+ V QLI+AER+++KA+++FDSA AEY NGFRH H
Sbjct: 1   MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSH 50


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/50 (60%), Positives = 40/50 (80%)
 Frame = -1

Query: 152 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSAAAEYANGFRHDH 3
           M SK +I W KQ+ S+ V QLI+AER+++KA+++FDSA AEY NGFRH H
Sbjct: 1   MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSH 50


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