BLASTX nr result

ID: Atractylodes22_contig00021409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021409
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2...   121   1e-25
ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquino...   120   2e-25
ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquino...   120   2e-25
ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|NP_201477.1| succinate dehydrogenase [ubiquinone] flavoprote...   119   6e-25

>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  121 bits (303), Expect = 1e-25
 Identities = 74/166 (44%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
 Frame = +1

Query: 163 MWRCVSRGLRIAPRRXXXXXXXXXXXXXXXXXXXXXXXISGDSI---SHRFFSSQSNTGR 333
           MWRCV+RGLR+                           +S DS    S RFFS+ S  G 
Sbjct: 1   MWRCVARGLRLPSSSSSTKI------------------LSNDSFRFHSTRFFSADSTGGG 42

Query: 334 SPYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACXXXXXXXXXXXXXXXXXXXXXXX 513
           S YT+VDHTYD                LSEHGFNTA                        
Sbjct: 43  SSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTA------------------------ 78

Query: 514 XXXXXXNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 651
                    CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD
Sbjct: 79  ---------CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 115


>ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like, partial [Cucumis sativus]
          Length = 186

 Score =  120 bits (302), Expect = 2e-25
 Identities = 73/163 (44%), Positives = 76/163 (46%)
 Frame = +1

Query: 163 MWRCVSRGLRIAPRRXXXXXXXXXXXXXXXXXXXXXXXISGDSISHRFFSSQSNTGRSPY 342
           MWRCVSRGLR +                              S   RFFS+ S  GRS Y
Sbjct: 1   MWRCVSRGLRASSSFSRKSSPNDHLR----------------SQFSRFFSADSTAGRSSY 44

Query: 343 TIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACXXXXXXXXXXXXXXXXXXXXXXXXXX 522
           T+VDHTYD                LSEHGFNTA                           
Sbjct: 45  TVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTA--------------------------- 77

Query: 523 XXXNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 651
                 CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD
Sbjct: 78  ------CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 114


>ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like [Cucumis sativus]
          Length = 635

 Score =  120 bits (302), Expect = 2e-25
 Identities = 73/163 (44%), Positives = 76/163 (46%)
 Frame = +1

Query: 163 MWRCVSRGLRIAPRRXXXXXXXXXXXXXXXXXXXXXXXISGDSISHRFFSSQSNTGRSPY 342
           MWRCVSRGLR +                              S   RFFS+ S  GRS Y
Sbjct: 1   MWRCVSRGLRASSSFSRKSSPNDHLR----------------SQFSRFFSADSTAGRSSY 44

Query: 343 TIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACXXXXXXXXXXXXXXXXXXXXXXXXXX 522
           T+VDHTYD                LSEHGFNTA                           
Sbjct: 45  TVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTA--------------------------- 77

Query: 523 XXXNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 651
                 CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD
Sbjct: 78  ------CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 114


>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  120 bits (302), Expect = 2e-25
 Identities = 75/166 (45%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
 Frame = +1

Query: 163 MWRCVSRGLRIAPRRXXXXXXXXXXXXXXXXXXXXXXXISGDSI-SH--RFFSSQSNTGR 333
           MWRCV+RGLR+                            S DS  SH  RFFS+ +  GR
Sbjct: 1   MWRCVARGLRLP---------------------CSTKRSSNDSFRSHISRFFSTDTTGGR 39

Query: 334 SPYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACXXXXXXXXXXXXXXXXXXXXXXX 513
           S YT+VDHTYD                LSEHGFNTA                        
Sbjct: 40  SSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTA------------------------ 75

Query: 514 XXXXXXNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 651
                    CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD
Sbjct: 76  ---------CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 112


>ref|NP_201477.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1
           [Arabidopsis thaliana]
           gi|20454872|sp|O82663.1|DHSA1_ARATH RecName:
           Full=Succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial; AltName: Full=Flavoprotein
           subunit 1 of complex II; Short=FP; Flags: Precursor
           gi|13605885|gb|AAK32928.1|AF367341_1 AT5g66760/MSN2_16
           [Arabidopsis thaliana]
           gi|16930699|gb|AAL32015.1|AF436833_1 AT5g66760/MSN2_16
           [Arabidopsis thaliana] gi|3660471|emb|CAA05025.1|
           succinate dehydrogenase flavoprotein alpha subunit
           [Arabidopsis thaliana] gi|8843734|dbj|BAA97282.1|
           succinate dehydrogenase flavoprotein alpha subunit
           [Arabidopsis thaliana] gi|15010746|gb|AAK74032.1|
           AT5g66760/MSN2_16 [Arabidopsis thaliana]
           gi|21700795|gb|AAM70521.1| AT5g66760/MSN2_16
           [Arabidopsis thaliana] gi|332010877|gb|AED98260.1|
           succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1 [Arabidopsis thaliana]
          Length = 634

 Score =  119 bits (297), Expect = 6e-25
 Identities = 73/163 (44%), Positives = 77/163 (47%)
 Frame = +1

Query: 163 MWRCVSRGLRIAPRRXXXXXXXXXXXXXXXXXXXXXXXISGDSISHRFFSSQSNTGRSPY 342
           MWRCVSRG R    +                       +SG   S RFFS+ S   RS Y
Sbjct: 1   MWRCVSRGFRAPASKTSSLFDG----------------VSGSRFS-RFFSTGSTDTRSSY 43

Query: 343 TIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACXXXXXXXXXXXXXXXXXXXXXXXXXX 522
           TIVDHTYD                LSEHGFNTA                           
Sbjct: 44  TIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTA--------------------------- 76

Query: 523 XXXNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 651
                 CITKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYD
Sbjct: 77  ------CITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYD 113


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