BLASTX nr result

ID: Atractylodes22_contig00021400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021400
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...    80   2e-13
ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244...    79   5e-13
ref|XP_002334623.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...    77   1e-12
ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...    73   3e-11

>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 925

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
 Frame = +2

Query: 8   GFYEPEAGDLIAFTHEKPRFFATR-NRPNGSAYLIAHVQKVDDEAPDTIQVICSKP--ID 178
           G YEPE GDLIAFT  KP+      NRP  + Y I +V  +  E+ D I ++ SK   +D
Sbjct: 114 GKYEPEVGDLIAFTDIKPKTVDDLINRPKRN-YHIGYVHGIK-ESIDKISILSSKSFDMD 171

Query: 179 IVFPESNKGRKPVFLANHLVNLTTNNRIWEALHSKLDG---KIINKVLQSDSESSQRCSL 349
           I F   +K   P   A HL+NLTTN RIW+AL S+L+G    ++ KVLQ+D  + + C L
Sbjct: 172 IQFALRSKSDAPKLYAFHLLNLTTNVRIWKALKSQLEGASLSMMKKVLQADINNGENCQL 231


>ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
          Length = 1076

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
 Frame = +2

Query: 14  YEPEAGDLIAFTHEKPRFFATRNRPNGS---AYLIAHVQKVDDEAP---DTIQVICSKPI 175
           YEPE GDLIA T  +P+  +  NRP  S   A ++A   +  DE P   DT  V+ SKPI
Sbjct: 141 YEPETGDLIALTDVRPKCISDLNRPKISYTVASVVAKPVRDPDEPPPEEDTCIVLSSKPI 200

Query: 176 DIVFP-ESNKGRKPVFLANHLVNLTTNNRIWEALHSKLD---GKIINKVLQSDSESSQRC 343
           +     E+NK RK +F A  L+N+ TNNRIW AL+   D     II KVLQ DS + + C
Sbjct: 201 EFEQNMETNKKRKTLF-AVFLINMITNNRIWAALNIGPDLGNKSIIQKVLQPDSLAGEEC 259

Query: 344 SL 349
           +L
Sbjct: 260 AL 261


>ref|XP_002334623.1| predicted protein [Populus trichocarpa] gi|222873723|gb|EEF10854.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 21/135 (15%)
 Frame = +2

Query: 5   KGFYEPEAGDLIAFTHEKPRFFATRNRPNGSAYLIAHVQ-----KVDDEAPDTIQVICSK 169
           +G YEP  GDL+A T  +P+     NRP G  YL+A+V      K D++  D + ++ SK
Sbjct: 115 EGIYEPGVGDLLALTDVRPKDIGDLNRP-GFNYLLAYVHGLSLAKDDNDKYDILSILTSK 173

Query: 170 PIDIVFPE---------SNKGRKPVFLAN----HLVNLTTNNRIWEALHSKLDG---KII 301
           PI     +         + KGR+   +AN    +LVN+ TN RIW +L+S L+G   KII
Sbjct: 174 PIQFELEDREIKKESVIAGKGRRKNMIANVFVVYLVNMMTNIRIWRSLNSDLEGGNMKII 233

Query: 302 NKVLQSDSESSQRCS 346
             VL + S   Q CS
Sbjct: 234 QNVLHTSSADGQLCS 248



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
 Frame = +2

Query: 5   KGFYEPEAGDLIAFTHEKPRFFATRNRPNGSAYLIAHVQKVDDEAPDTIQVICSKPIDIV 184
           +G Y P  GDLIA T+ K +      +   S Y +A V  V      T  ++ SKPI   
Sbjct: 320 RGGYVPWVGDLIALTNVKLKCIDDLRKTQQS-YHVAFVHAVKRGNRLTASILSSKPI--- 375

Query: 185 FPESNKGRKPVFLANHLVNLTTNNRIWEALHSKLDGK---IINKVLQSD 322
             +    +     A  L+NLTTN RIW +LH +L+G+   +I KVLQ++
Sbjct: 376 -VDEEGLKNGTLFAVRLINLTTNLRIWRSLHLELEGRNMNVIEKVLQNN 423


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
 Frame = +2

Query: 8   GFYEPEAGDLIAFTHEKPRFFATRNRPNGSAYLIAHVQKVDDEAPDTIQVICSKPIDIVF 187
           G Y+PE GDLIA T  KP+     NRP    Y IA+V     E+   I ++ SK ID+  
Sbjct: 115 GPYQPEVGDLIALTDFKPKTVEDLNRPR-RYYHIAYVYG-SKESSGEISILSSKCIDMEV 172

Query: 188 PES--NKGRKPVFLANHLVNLTTNNRIWEALHSKLDG---KIINKVLQSDSESSQRCSL 349
             +       P   A +L+NLTTN RIW+AL+S+L+G    +I KVLQ+DS + + C L
Sbjct: 173 DSNYLRSNNAPKLYAVYLLNLTTNIRIWKALNSELEGAKMNMIKKVLQADSNNGENCQL 231


>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 978

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
 Frame = +2

Query: 8   GFYEPEAGDLIAFTHEKPRFFATRNRPNGSAYLIAHVQKVDDEAPDTIQVICSKPIDIVF 187
           G YEPE GDLIAFT+ +PR     +R     + IA++    DE  D I ++ S   D+  
Sbjct: 108 GKYEPEVGDLIAFTNIRPRSVDDLSRIKRYCH-IAYIHGSKDEFTDEIPILLSYEFDL-- 164

Query: 188 PESNKGRKPVFLANHLVNLTTNNRIWEALHSKLDG---KIINKVLQSDSESSQRC 343
            + NK +K    A  L+N+TTN RIW+AL+S+++G    II KVLQ  S   Q C
Sbjct: 165 -KRNKAQK--LYAVCLINMTTNVRIWKALNSEMEGSDMNIIQKVLQPYSRMEQNC 216


Top