BLASTX nr result
ID: Atractylodes22_contig00021386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00021386
(1035 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 270 6e-70
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 270 6e-70
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 269 9e-70
ref|XP_002308050.1| predicted protein [Populus trichocarpa] gi|2... 254 2e-65
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub... 251 2e-64
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 270 bits (689), Expect = 6e-70
Identities = 141/235 (60%), Positives = 173/235 (73%)
Frame = +1
Query: 208 AIFVEVKDLNLEVHFRFTNEPEILLAEVAQKTAKKVYIKGSGKLDQCQPVKYSVNVKQVC 387
AI V+ K EVHFRFTNEP ILLA++AQK A KVYI+ SGK+D CQ + N QV
Sbjct: 1445 AILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI--DCNKDQVI 1502
Query: 388 WNQKHPEISXXXXXXXXXXXXXXXGCLPCALQASGVELPAFWDMEDDLDMDHVYSNNIYT 567
+ + P+ LP ALQ +GV+ AFW M+D+LD+ +VYSNN++
Sbjct: 1503 YYGRDPKKRENIPGEEKKK-------LP-ALQTAGVDFTAFWKMQDELDVRYVYSNNVHA 1554
Query: 568 MLNTYGVEAARTGIILEMKNVFGSYGVEIDYRHLSLIADYMTHSGGYRPMSRFGSISESV 747
MLNT+GVEAAR II E+ NVF +YGV+++ RHLSLIAD+MTHSGGYRPM+R G I+ESV
Sbjct: 1555 MLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESV 1614
Query: 748 SPFLKMSFETASKFIVEAASHGMRDNLETPTARICLGLPVKVGTGSMELMQKLNI 912
SPF KM+FETASKFIVEAASHGM DNLE+ +ARICLGLPVK+GTG +LMQK+ I
Sbjct: 1615 SPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1669
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 270 bits (689), Expect = 6e-70
Identities = 141/235 (60%), Positives = 173/235 (73%)
Frame = +1
Query: 208 AIFVEVKDLNLEVHFRFTNEPEILLAEVAQKTAKKVYIKGSGKLDQCQPVKYSVNVKQVC 387
AI V+ K EVHFRFTNEP ILLA++AQK A KVYI+ SGK+D CQ + N QV
Sbjct: 1516 AILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI--DCNKDQVI 1573
Query: 388 WNQKHPEISXXXXXXXXXXXXXXXGCLPCALQASGVELPAFWDMEDDLDMDHVYSNNIYT 567
+ + P+ LP ALQ +GV+ AFW M+D+LD+ +VYSNN++
Sbjct: 1574 YYGRDPKKRENIPGEEKKK-------LP-ALQTAGVDFTAFWKMQDELDVRYVYSNNVHA 1625
Query: 568 MLNTYGVEAARTGIILEMKNVFGSYGVEIDYRHLSLIADYMTHSGGYRPMSRFGSISESV 747
MLNT+GVEAAR II E+ NVF +YGV+++ RHLSLIAD+MTHSGGYRPM+R G I+ESV
Sbjct: 1626 MLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESV 1685
Query: 748 SPFLKMSFETASKFIVEAASHGMRDNLETPTARICLGLPVKVGTGSMELMQKLNI 912
SPF KM+FETASKFIVEAASHGM DNLE+ +ARICLGLPVK+GTG +LMQK+ I
Sbjct: 1686 SPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1740
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 269 bits (687), Expect = 9e-70
Identities = 140/235 (59%), Positives = 169/235 (71%)
Frame = +1
Query: 208 AIFVEVKDLNLEVHFRFTNEPEILLAEVAQKTAKKVYIKGSGKLDQCQPVKYSVNVKQVC 387
AIFVE + ++ EVHF+FTNEP ILLAE+AQKTAKKVYI+ GK++QC+ QV
Sbjct: 1462 AIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVT--DCKESQVI 1519
Query: 388 WNQKHPEISXXXXXXXXXXXXXXXGCLPCALQASGVELPAFWDMEDDLDMDHVYSNNIYT 567
+ K P+ AL A+GV+ FW M+D LD+ ++YSNNI+
Sbjct: 1520 YYGKDPKERVDLKPDVKEKVP--------ALHATGVDFNTFWKMQDHLDVRYIYSNNIHA 1571
Query: 568 MLNTYGVEAARTGIILEMKNVFGSYGVEIDYRHLSLIADYMTHSGGYRPMSRFGSISESV 747
ML TYGVEAAR II E+ +VF SYG+ + RHLSLIAD+MTH+GGYRPMSR G I+ES+
Sbjct: 1572 MLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESI 1631
Query: 748 SPFLKMSFETASKFIVEAASHGMRDNLETPTARICLGLPVKVGTGSMELMQKLNI 912
SPF KMSFETASKFIVEAA HG DNLETP+ARICLGLPVK+GTGS +LMQKL I
Sbjct: 1632 SPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLEI 1686
>ref|XP_002308050.1| predicted protein [Populus trichocarpa] gi|222854026|gb|EEE91573.1|
predicted protein [Populus trichocarpa]
Length = 464
Score = 254 bits (649), Expect = 2e-65
Identities = 135/235 (57%), Positives = 163/235 (69%)
Frame = +1
Query: 208 AIFVEVKDLNLEVHFRFTNEPEILLAEVAQKTAKKVYIKGSGKLDQCQPVKYSVNVKQVC 387
+IFVE K L+ E+H +FTNEP ILLAE+AQKTAKKV I+ GK+ +CQ N QV
Sbjct: 240 SIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVTDCKEN--QVI 297
Query: 388 WNQKHPEISXXXXXXXXXXXXXXXGCLPCALQASGVELPAFWDMEDDLDMDHVYSNNIYT 567
+ K P+ AL GV+ FW M+D LD+ ++YSN+I+
Sbjct: 298 YYGKDPKRRIDIEPGEKQKIP--------ALHTIGVDFNTFWKMQDHLDVRYMYSNSIHG 349
Query: 568 MLNTYGVEAARTGIILEMKNVFGSYGVEIDYRHLSLIADYMTHSGGYRPMSRFGSISESV 747
ML YGVEAAR II E+K+VF SYG+ ++ RHLSLIADYMTH+G YRPMSR G ISES+
Sbjct: 350 MLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESI 409
Query: 748 SPFLKMSFETASKFIVEAASHGMRDNLETPTARICLGLPVKVGTGSMELMQKLNI 912
SP KMSFETASKFIVEAA HG DNLE P+AR+CLGLPVK+GTGS +LMQKL I
Sbjct: 410 SPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKLEI 464
>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1653
Score = 251 bits (642), Expect = 2e-64
Identities = 131/237 (55%), Positives = 166/237 (70%), Gaps = 2/237 (0%)
Frame = +1
Query: 208 AIFVEVKDLNLEVHFRFTNEPEILLAEVAQKTAKKVYIKGSGKLDQCQPV--KYSVNVKQ 381
AIFVE K + E+HFRFT EP ILL ++AQ+TAKKV I+ GK+ +C+ + K S +
Sbjct: 1429 AIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYY 1488
Query: 382 VCWNQKHPEISXXXXXXXXXXXXXXXGCLPCALQASGVELPAFWDMEDDLDMDHVYSNNI 561
+K EIS ALQ SGV FW++EDDLD+ ++YSNN+
Sbjct: 1489 GKDGRKRIEISASEKEQIP------------ALQTSGVHFKTFWELEDDLDVRYIYSNNV 1536
Query: 562 YTMLNTYGVEAARTGIILEMKNVFGSYGVEIDYRHLSLIADYMTHSGGYRPMSRFGSISE 741
+ MLN YGVEAAR II E++NVF SYG+ ++ RHL+LIAD+MTH+G YRPM+R GSI++
Sbjct: 1537 HAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIAD 1596
Query: 742 SVSPFLKMSFETASKFIVEAASHGMRDNLETPTARICLGLPVKVGTGSMELMQKLNI 912
S SPF+KM FETA FIVEAA HG DNLETP+ARICLGLPVK+GTG +L+QKL I
Sbjct: 1597 STSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKMGTGCHDLIQKLEI 1653