BLASTX nr result

ID: Atractylodes22_contig00021307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021307
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38854.1| unknown [Medicago truncatula]                          181   7e-44
ref|XP_003597624.1| RNA exonuclease [Medicago truncatula] gi|358...   181   7e-44
ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max]   172   3e-41
gb|ACU17968.1| unknown [Glycine max]                                  172   3e-41
emb|CBI32345.3| unnamed protein product [Vitis vinifera]              168   4e-40

>gb|AFK38854.1| unknown [Medicago truncatula]
          Length = 366

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/146 (58%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
 Frame = +1

Query: 1   SLREHILGPLAKVHCSSVFAQKGCHICLRVFESPVSLGEHKSLCLLTAPAPLGTTNIP-- 174
           SLREH+ GPLAK  CS+VF+Q GC +CL  F+S  SL +H+  C L AP PLGT   P  
Sbjct: 58  SLREHLTGPLAKGLCSAVFSQYGCQLCLTRFDSHASLSDHRETCRLAAPVPLGTNEFPCT 117

Query: 175 --YKEYKVLEDENCNRKCPEAVAIDCQMVGCGSDGSLDILARVCLVDEEENMIFHTYVQP 348
             +  +    DEN     P A+A+DC+MVG GSDGSL++ ARVCLVDE+EN+IFHTYV+P
Sbjct: 118 NIHNNFLDSSDENDADCLPRAIAMDCEMVGGGSDGSLELCARVCLVDEDENLIFHTYVKP 177

Query: 349 QISVTDYRYEVTGLTEEHLRDAMPLR 426
           QI VT+YRY++TGLTEEHL+D MPL+
Sbjct: 178 QIPVTNYRYDITGLTEEHLQDGMPLK 203


>ref|XP_003597624.1| RNA exonuclease [Medicago truncatula]
           gi|358344695|ref|XP_003636423.1| RNA exonuclease
           [Medicago truncatula] gi|217072104|gb|ACJ84412.1|
           unknown [Medicago truncatula]
           gi|355486672|gb|AES67875.1| RNA exonuclease [Medicago
           truncatula] gi|355502358|gb|AES83561.1| RNA exonuclease
           [Medicago truncatula] gi|388504350|gb|AFK40241.1|
           unknown [Medicago truncatula]
          Length = 366

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/146 (58%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
 Frame = +1

Query: 1   SLREHILGPLAKVHCSSVFAQKGCHICLRVFESPVSLGEHKSLCLLTAPAPLGTTNIP-- 174
           SLREH+ GPLAK  CS+VF+Q GC +CL  F+S  SL +H+  C L AP PLGT   P  
Sbjct: 58  SLREHLTGPLAKGLCSAVFSQYGCQLCLTRFDSHASLSDHRETCRLAAPVPLGTNEFPCT 117

Query: 175 --YKEYKVLEDENCNRKCPEAVAIDCQMVGCGSDGSLDILARVCLVDEEENMIFHTYVQP 348
             +  +    DEN     P A+A+DC+MVG GSDGSL++ ARVCLVDE+EN+IFHTYV+P
Sbjct: 118 NIHNNFLDSSDENDADCLPRAIAMDCEMVGGGSDGSLELCARVCLVDEDENLIFHTYVKP 177

Query: 349 QISVTDYRYEVTGLTEEHLRDAMPLR 426
           QI VT+YRY++TGLTEEHL+D MPL+
Sbjct: 178 QIPVTNYRYDITGLTEEHLQDGMPLK 203


>ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max]
          Length = 366

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/147 (56%), Positives = 113/147 (76%), Gaps = 5/147 (3%)
 Frame = +1

Query: 1   SLREHILGPLAKVHCSSVFAQKGCHICLRVFESPVSLGEHKSLCLLTAPAPLGTTNIPYK 180
           SLREH+ GPL +  CS +F+Q+GC +CL +F+SP SL +H+ +C ++AP   GT+ +PY 
Sbjct: 58  SLREHLTGPLPRGICSKIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPYI 117

Query: 181 EYKV----LEDENCNRKCPE-AVAIDCQMVGCGSDGSLDILARVCLVDEEENMIFHTYVQ 345
           + +       DEN   + P  AVA+DC+MVG GSDGSL++ ARVCLVDE+E +IFHTYVQ
Sbjct: 118 DSQFDCQDFSDENHAGEGPGGAVAMDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQ 177

Query: 346 PQISVTDYRYEVTGLTEEHLRDAMPLR 426
           P+I VT+YRY++TGLTEEHLR+AMPL+
Sbjct: 178 PEIPVTNYRYDITGLTEEHLRNAMPLK 204


>gb|ACU17968.1| unknown [Glycine max]
          Length = 241

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/147 (56%), Positives = 113/147 (76%), Gaps = 5/147 (3%)
 Frame = +1

Query: 1   SLREHILGPLAKVHCSSVFAQKGCHICLRVFESPVSLGEHKSLCLLTAPAPLGTTNIPYK 180
           SLREH+ GPL +  CS +F+Q+GC +CL +F+SP SL +H+ +C ++AP   GT+ +PY 
Sbjct: 58  SLREHLTGPLPRGICSKIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPYI 117

Query: 181 EYKV----LEDENCNRKCPE-AVAIDCQMVGCGSDGSLDILARVCLVDEEENMIFHTYVQ 345
           + +       DEN   + P  AVA+DC+MVG GSDGSL++ ARVCLVDE+E +IFHTYVQ
Sbjct: 118 DSQFDCQDFSDENHAGEGPGGAVAMDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQ 177

Query: 346 PQISVTDYRYEVTGLTEEHLRDAMPLR 426
           P+I VT+YRY++TGLTEEHLR+AMPL+
Sbjct: 178 PEIPVTNYRYDITGLTEEHLRNAMPLK 204


>emb|CBI32345.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/146 (54%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
 Frame = +1

Query: 1   SLREHILGPLAKVHCSSVFAQKGCHICLRVFESPVSLGEHKSLCLLTAPAPLGTTNIPYK 180
           SLREH+ G L K +C  +F+++GC+ CL++F++  SL EHK +C L  P  +    +P  
Sbjct: 58  SLREHLTGNLPKKNCLKIFSEQGCNYCLKIFKNADSLSEHKEMCQLPVPVTIEKIRMPST 117

Query: 181 EYKVLEDENCNR----KCPEAVAIDCQMVGCGSDGSLDILARVCLVDEEENMIFHTYVQP 348
           E ++   ++ NR    +  EA+AIDC+ VG GSDGSLD+ ARVCL+DE+EN+IFHTYVQP
Sbjct: 118 ESQIDFSDSINRDHTSRGLEAIAIDCEKVGGGSDGSLDLCARVCLIDEDENIIFHTYVQP 177

Query: 349 QISVTDYRYEVTGLTEEHLRDAMPLR 426
           QI VT+YRYE+TG+TE HLRDAMPL+
Sbjct: 178 QIPVTNYRYELTGITEAHLRDAMPLK 203


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