BLASTX nr result

ID: Atractylodes22_contig00021258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021258
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   110   2e-22
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      108   3e-22
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas...   106   2e-21
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         104   8e-21
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   103   1e-20

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = -1

Query: 242 DLHMVFIDLEKAYDSVPRDLIWRCLEDRGVPQIYIRAIRDMYGQATTCVRTPMGETDFFQ 63
           DLHMVFIDLEKAYD V RD+IWR LE +GV   YI+AI+DMY  A T VRT  G+T+ F 
Sbjct: 301 DLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFP 360

Query: 62  VDIGLHQGSALSPFLFAVIM 3
           + +GLHQGS+LSP+LFA++M
Sbjct: 361 ITVGLHQGSSLSPYLFALVM 380


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/80 (61%), Positives = 64/80 (80%)
 Frame = -1

Query: 242 DLHMVFIDLEKAYDSVPRDLIWRCLEDRGVPQIYIRAIRDMYGQATTCVRTPMGETDFFQ 63
           DLH++FIDLEKAYD VPR+++W+ LE +GV   YIRAI+DMY + +T VRT  GE+D F 
Sbjct: 26  DLHLIFIDLEKAYDRVPREILWKALEKKGVRVAYIRAIQDMYDRVSTSVRTQGGESDDFP 85

Query: 62  VDIGLHQGSALSPFLFAVIM 3
           + IGLHQGS LSP+LF +I+
Sbjct: 86  ITIGLHQGSTLSPYLFTLIL 105


>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 243

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/80 (60%), Positives = 64/80 (80%)
 Frame = -1

Query: 242 DLHMVFIDLEKAYDSVPRDLIWRCLEDRGVPQIYIRAIRDMYGQATTCVRTPMGETDFFQ 63
           DLH+VFIDLEKAYD VPR+++W+ L+ +GV   YI+AI+DMY  A+TCVRT  G+T  F 
Sbjct: 130 DLHLVFIDLEKAYDRVPREILWKALKKKGVRIAYIKAIQDMYEGASTCVRTQDGDTVDFP 189

Query: 62  VDIGLHQGSALSPFLFAVIM 3
           + IGLHQGS LSP+LF +++
Sbjct: 190 ITIGLHQGSTLSPYLFTLVL 209


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  104 bits (259), Expect = 8e-21
 Identities = 49/80 (61%), Positives = 62/80 (77%)
 Frame = -1

Query: 242 DLHMVFIDLEKAYDSVPRDLIWRCLEDRGVPQIYIRAIRDMYGQATTCVRTPMGETDFFQ 63
           DLHMVFIDLEKAYD VPR+++W+ LE   V   YIRAI+DMY  ATT V+T  G T+ F 
Sbjct: 191 DLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFP 250

Query: 62  VDIGLHQGSALSPFLFAVIM 3
           + IGLHQGS+LSP+LF +++
Sbjct: 251 IGIGLHQGSSLSPYLFTIVL 270


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/80 (61%), Positives = 59/80 (73%)
 Frame = -1

Query: 242 DLHMVFIDLEKAYDSVPRDLIWRCLEDRGVPQIYIRAIRDMYGQATTCVRTPMGETDFFQ 63
           DLHMVFIDLEKAYD +PR+++W  LE   VP  YI  I+DMY    T VRT  G+TD F 
Sbjct: 215 DLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDGDTDDFP 274

Query: 62  VDIGLHQGSALSPFLFAVIM 3
           + IGLHQGSALSP+LF ++M
Sbjct: 275 IKIGLHQGSALSPYLFDLVM 294


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