BLASTX nr result

ID: Atractylodes22_contig00021241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021241
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636171.1| Pentatricopeptide repeat-containing protein ...    71   8e-11
ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]    67   1e-09
ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_003636171.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502106|gb|AES83309.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 132

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = -3

Query: 164 SSSSSVPKVYNYGTVDYEKKAGTTVTWKAIYKRISMMGNREKGSTSVLNQWENE 3
           S + S+ K++NYGT+DYE+K    + W AIYKRISMM N E GS SVLNQWENE
Sbjct: 52  SVTCSISKIHNYGTLDYERKPN--LKWNAIYKRISMMENPELGSASVLNQWENE 103


>ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
           [Vitis vinifera]
          Length = 527

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/76 (47%), Positives = 49/76 (64%)
 Frame = -3

Query: 230 LPGFGNSPLKRGQFNPLIIRNCSSSSSVPKVYNYGTVDYEKKAGTTVTWKAIYKRISMMG 51
           L GF +  L R     +  R  S + S+ ++++YGTVDYE++    V W A+Y+RIS+M 
Sbjct: 15  LSGFPSFTLPRS----VNYRKHSITCSISQIHSYGTVDYERRP--LVKWNAVYRRISLME 68

Query: 50  NREKGSTSVLNQWENE 3
           N E GS SVLNQWENE
Sbjct: 69  NPEMGSASVLNQWENE 84


>emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
          Length = 736

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/76 (47%), Positives = 49/76 (64%)
 Frame = -3

Query: 230 LPGFGNSPLKRGQFNPLIIRNCSSSSSVPKVYNYGTVDYEKKAGTTVTWKAIYKRISMMG 51
           L GF +  L R     +  R  S + S+ ++++YGTVDYE++    V W A+Y+RIS+M 
Sbjct: 15  LSGFPSFTLPRS----VNYRKHSITCSISQIHSYGTVDYERRP--LVKWNAVYRRISLME 68

Query: 50  NREKGSTSVLNQWENE 3
           N E GS SVLNQWENE
Sbjct: 69  NPEMGSASVLNQWENE 84


>ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|222842965|gb|EEE80512.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = -3

Query: 152 SVPKVYNYGTVDYEKKAGTTVTWKAIYKRISMMGNREKGSTSVLNQWENE 3
           S+ +++NYGTVDYE++    + W AIY+RIS+M N E GS SVLNQWEN+
Sbjct: 48  SISQIHNYGTVDYERRP--MMKWNAIYRRISLMENPELGSGSVLNQWEND 95


>ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|222835341|gb|EEE73776.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = -3

Query: 152 SVPKVYNYGTVDYEKKAGTTVTWKAIYKRISMMGNREKGSTSVLNQWENE 3
           S+ +V+NYGTVDYE++    + W  IY+RIS+M N E GS SVLN+WENE
Sbjct: 48  SISQVHNYGTVDYERRP--MIKWNGIYRRISLMENPELGSGSVLNRWENE 95


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