BLASTX nr result

ID: Atractylodes22_contig00021231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021231
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41613.1| unknown [Lotus japonicus]                              247   4e-63
gb|ABK93662.1| unknown [Populus trichocarpa]                          242   1e-61
ref|XP_003527200.1| PREDICTED: protein RER1B-like [Glycine max]       240   4e-61
ref|XP_003606941.1| Protein RER1B [Medicago truncatula] gi|21707...   240   4e-61
ref|XP_003569310.1| PREDICTED: protein RER1B-like [Brachypodium ...   239   1e-60

>gb|AFK41613.1| unknown [Lotus japonicus]
          Length = 194

 Score =  247 bits (630), Expect = 4e-63
 Identities = 116/179 (64%), Positives = 137/179 (76%), Gaps = 1/179 (0%)
 Frame = -1

Query: 724 MEGIGGANGASAATVDQW-RQFSRLFQFYLDKSTPHAIYRWTGTAVLAFLFALRVXXXXX 548
           MEG GG++ ++AA V+QW  +FS++FQ+YLDKSTPH  YRW GT V+A ++ LRV     
Sbjct: 1   MEGTGGSSASAAAPVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQG 60

Query: 547 XXXXXXXXXXXXXXXXXXXLSPLVDPEVEPTDGPMLPTKGSDEFKPFIRRLPEFKFWYAI 368
                              L PLVDPEVE +DGP+LPTKGSDEFKPFIRRLPEFKFWY+ 
Sbjct: 61  FYIVSYGLGIYLLNLLIGFLPPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 367 TKAFIISFVMTFFSMFDVPVFWPILLCYWLVLFTLTMKRQIMHMIKYKYVPFNIGKQKY 191
           TKAF I+FVMTFFS+FDVPVFWPILLCYW+VLF LTM+RQI HMIKYKY+P N+GKQKY
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNLGKQKY 179


>gb|ABK93662.1| unknown [Populus trichocarpa]
          Length = 194

 Score =  242 bits (617), Expect = 1e-61
 Identities = 111/179 (62%), Positives = 135/179 (75%), Gaps = 1/179 (0%)
 Frame = -1

Query: 724 MEGIGGANGASAATVDQW-RQFSRLFQFYLDKSTPHAIYRWTGTAVLAFLFALRVXXXXX 548
           MEG+G    ++A+ V QW     R++Q+YLDKSTPH ++RW GT V+  ++ LRV     
Sbjct: 1   MEGVGAEGASAASPVAQWGNDVWRMYQYYLDKSTPHTVHRWIGTFVVMAIYCLRVYYVQG 60

Query: 547 XXXXXXXXXXXXXXXXXXXLSPLVDPEVEPTDGPMLPTKGSDEFKPFIRRLPEFKFWYAI 368
                              LSPLVDPE++P+DGP+LPTKGSDEFKPFIRRLPEFKFWY+ 
Sbjct: 61  FYIIAYGLGIYILNLLIGFLSPLVDPEIDPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 367 TKAFIISFVMTFFSMFDVPVFWPILLCYWLVLFTLTMKRQIMHMIKYKYVPFNIGKQKY 191
           TKAF+I+FVMTFFSMFDVPVFWPILLCYW+VLF LTM+RQI HMIK+KY+PFN+GKQKY
Sbjct: 121 TKAFVIAFVMTFFSMFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKFKYIPFNVGKQKY 179


>ref|XP_003527200.1| PREDICTED: protein RER1B-like [Glycine max]
          Length = 194

 Score =  240 bits (612), Expect = 4e-61
 Identities = 113/179 (63%), Positives = 133/179 (74%), Gaps = 1/179 (0%)
 Frame = -1

Query: 724 MEGIGGANGASAATVDQW-RQFSRLFQFYLDKSTPHAIYRWTGTAVLAFLFALRVXXXXX 548
           MEG GG   + +A V Q+   FS+LFQ+YLDKSTPH+ YRW GT V+A ++ LRV     
Sbjct: 1   MEGSGGGGASPSAPVKQYLHDFSKLFQYYLDKSTPHSTYRWIGTFVIASIYVLRVVYVQG 60

Query: 547 XXXXXXXXXXXXXXXXXXXLSPLVDPEVEPTDGPMLPTKGSDEFKPFIRRLPEFKFWYAI 368
                              LSPLVDPE++P+D P+LPTKGSDEFKPFIRRLPEFKFWY+ 
Sbjct: 61  FYIVSYGLGIYLLNLLIGFLSPLVDPELDPSDSPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 367 TKAFIISFVMTFFSMFDVPVFWPILLCYWLVLFTLTMKRQIMHMIKYKYVPFNIGKQKY 191
           TKA  I+FVMTFFS+FDVPVFWPILLCYW VLF LTM+RQ+ HMIKYKY+PFN+GKQKY
Sbjct: 121 TKALCIAFVMTFFSLFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKY 179


>ref|XP_003606941.1| Protein RER1B [Medicago truncatula] gi|217070980|gb|ACJ83850.1|
           unknown [Medicago truncatula]
           gi|355507996|gb|AES89138.1| Protein RER1B [Medicago
           truncatula] gi|388514019|gb|AFK45071.1| unknown
           [Medicago truncatula]
          Length = 197

 Score =  240 bits (612), Expect = 4e-61
 Identities = 118/181 (65%), Positives = 140/181 (77%), Gaps = 3/181 (1%)
 Frame = -1

Query: 724 MEGIGGANG-ASAATVDQWRQ-FSRLFQFYLDKSTPHAIYRWTGTAVLAFLFALRVXXXX 551
           MEG GG++  A+AAT  QW Q FS+LFQ YLDKSTPH+ YRW GT V+A ++ LRV    
Sbjct: 1   MEGPGGSSASATAATPPQWWQDFSKLFQHYLDKSTPHSTYRWIGTFVIASIYGLRVFYLQ 60

Query: 550 XXXXXXXXXXXXXXXXXXXXLSPLVDPEVEPTDG-PMLPTKGSDEFKPFIRRLPEFKFWY 374
                               LSPLVDPE+EP+DG P+LPTKGSDEFKPFIRRLPEFKFWY
Sbjct: 61  GFYIVSYGLGIYMLNLLIGFLSPLVDPELEPSDGGPLLPTKGSDEFKPFIRRLPEFKFWY 120

Query: 373 AITKAFIISFVMTFFSMFDVPVFWPILLCYWLVLFTLTMKRQIMHMIKYKYVPFNIGKQK 194
           + TKAF+I+F+MTFFS+FDVPVFWPILLCYW+VLF LTM+RQI HMIKY+Y+PF++GKQK
Sbjct: 121 SFTKAFLIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYRYIPFSLGKQK 180

Query: 193 Y 191
           Y
Sbjct: 181 Y 181


>ref|XP_003569310.1| PREDICTED: protein RER1B-like [Brachypodium distachyon]
          Length = 202

 Score =  239 bits (609), Expect = 1e-60
 Identities = 116/180 (64%), Positives = 134/180 (74%), Gaps = 4/180 (2%)
 Frame = -1

Query: 718 GIGGANGASAATVDQWRQ-FSRLFQFYLDKSTPHAIYRWTGTAVLAFLFALRVXXXXXXX 542
           G GG  GA+AA   +WR   SR FQ+YLD+STPHA  RW GT   A ++ALRV       
Sbjct: 9   GGGGGGGAAAAAAAKWRSDASRAFQYYLDRSTPHATGRWVGTLAAAAIYALRVYMVHGFY 68

Query: 541 XXXXXXXXXXXXXXXXXLSPLVDPEVEPT---DGPMLPTKGSDEFKPFIRRLPEFKFWYA 371
                            LSP+VDPE++P+   DGP LPT+GSDEFKPFIRRLPEFKFWYA
Sbjct: 69  IVSYGLGIYLLNLLIGFLSPMVDPELDPSAAADGPALPTRGSDEFKPFIRRLPEFKFWYA 128

Query: 370 ITKAFIISFVMTFFSMFDVPVFWPILLCYWLVLFTLTMKRQIMHMIKYKYVPFNIGKQKY 191
           ITKAF+++FVMTFFS+FDVPVFWPILLCYW+VLF LTMKRQI+HM+KYKYVPFNIGKQKY
Sbjct: 129 ITKAFVVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPFNIGKQKY 188