BLASTX nr result

ID: Atractylodes22_contig00021205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021205
         (1781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398351.1| ribosomal protein S18 [Lactuca sativa] gi|12224...   192   2e-46
ref|YP_588139.1| ribosomal protein S18 [Helianthus annuus] gi|18...   191   4e-46
ref|YP_004465209.1| ribosomal protein S18 [Jacobaea vulgaris] gi...   190   9e-46
ref|YP_007353788.1| ribosomal protein S18 (chloroplast) [Chrysan...   188   4e-45
ref|YP_740139.1| ribosomal protein S18 [Daucus carota] gi|122233...   181   4e-43

>ref|YP_398351.1| ribosomal protein S18 [Lactuca sativa]
           gi|122248966|sp|Q332V6.1|RR18_LACSA RecName: Full=30S
           ribosomal protein S18, chloroplastic
           gi|78675190|dbj|BAE47616.1| chloroplast 30S ribosomal
           protein S18 [Lactuca sativa] gi|88657005|gb|ABD47255.1|
           ribosomal protein S18 [Lactuca sativa]
          Length = 101

 Score =  192 bits (489), Expect = 2e-46
 Identities = 100/101 (99%), Positives = 101/101 (100%)
 Frame = -2

Query: 580 MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNISLISRFISEQGKILSRRVNRLTLKQQR 401
           MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKN+SLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1   MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 400 LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 278
           LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR
Sbjct: 61  LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 101


>ref|YP_588139.1| ribosomal protein S18 [Helianthus annuus]
           gi|183217763|ref|YP_001837382.1| ribosomal protein S18
           [Guizotia abyssinica] gi|281190743|ref|YP_003330980.1|
           ribosomal protein S18 [Parthenium argentatum]
           gi|334701824|ref|YP_004564394.1| ribosomal protein S18
           (chloroplast) [Ageratina adenophora]
           gi|122244029|sp|Q1KXT7.1|RR18_HELAN RecName: Full=30S
           ribosomal protein S18, chloroplastic
           gi|205831392|sp|B2LML5.1|RR18_GUIAB RecName: Full=30S
           ribosomal protein S18, chloroplastic
           gi|88656917|gb|ABD47168.1| ribosomal protein S18
           [Helianthus annuus] gi|179366278|gb|ACB86549.1|
           ribosomal protein S18 [Guizotia abyssinica]
           gi|269924856|gb|ACZ52729.1| ribosomal protein S18
           [Parthenium argentatum] gi|334089695|gb|AEG64578.1|
           ribosomal protein S18 (chloroplast) [Ageratina
           adenophora]
          Length = 101

 Score =  191 bits (486), Expect = 4e-46
 Identities = 99/101 (98%), Positives = 101/101 (100%)
 Frame = -2

Query: 580 MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNISLISRFISEQGKILSRRVNRLTLKQQR 401
           MDKSKRTFLKSKRSFR+RLPPIQSGDRIDYKN+SLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1   MDKSKRTFLKSKRSFRKRLPPIQSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 400 LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 278
           LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR
Sbjct: 61  LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 101


>ref|YP_004465209.1| ribosomal protein S18 [Jacobaea vulgaris]
           gi|308156104|gb|ADO15432.1| ribosomal protein S18
           [Jacobaea vulgaris]
          Length = 101

 Score =  190 bits (483), Expect = 9e-46
 Identities = 98/101 (97%), Positives = 101/101 (100%)
 Frame = -2

Query: 580 MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNISLISRFISEQGKILSRRVNRLTLKQQR 401
           MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKN+SLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1   MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 400 LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 278
           LITIAIKQARILSLLPFLNN+KQFERTESTTRTP+LRARKR
Sbjct: 61  LITIAIKQARILSLLPFLNNDKQFERTESTTRTPNLRARKR 101


>ref|YP_007353788.1| ribosomal protein S18 (chloroplast) [Chrysanthemum x morifolium]
           gi|452849073|ref|YP_007474751.1| ribosomal protein S18
           (chloroplast) [Chrysanthemum indicum]
           gi|372863228|gb|AEX99300.1| ribosomal protein S18
           (chloroplast) [Chrysanthemum indicum]
           gi|372863467|gb|AEX99536.1| ribosomal protein S18
           (chloroplast) [Chrysanthemum indicum]
           gi|375298857|gb|AFA45296.1| ribosomal protein S18
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 101

 Score =  188 bits (478), Expect = 4e-45
 Identities = 98/101 (97%), Positives = 99/101 (98%)
 Frame = -2

Query: 580 MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNISLISRFISEQGKILSRRVNRLTLKQQR 401
           MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKN+SLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1   MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 400 LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 278
           LITIAIKQARILSLLPFLNNEKQ ERTE TTRTPSLRARKR
Sbjct: 61  LITIAIKQARILSLLPFLNNEKQLERTEPTTRTPSLRARKR 101


>ref|YP_740139.1| ribosomal protein S18 [Daucus carota]
           gi|122233831|sp|Q0G9U0.1|RR18_DAUCA RecName: Full=30S
           ribosomal protein S18, chloroplastic
           gi|113200930|gb|ABI32446.1| ribosomal protein S18
           [Daucus carota] gi|156574736|gb|ABU85200.1| ribosomal
           protein S18 [Anethum graveolens]
          Length = 101

 Score =  181 bits (460), Expect = 4e-43
 Identities = 94/101 (93%), Positives = 97/101 (96%)
 Frame = -2

Query: 580 MDKSKRTFLKSKRSFRRRLPPIQSGDRIDYKNISLISRFISEQGKILSRRVNRLTLKQQR 401
           MDKSKR FLKSKRSFRRRLPPIQSGDRIDY+N+SLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1   MDKSKRPFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 400 LITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 278
           LITIAIKQARILSLLPFLNNEKQFERTESTTRT  LRAR +
Sbjct: 61  LITIAIKQARILSLLPFLNNEKQFERTESTTRTAGLRARNK 101


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