BLASTX nr result

ID: Atractylodes22_contig00021145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021145
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317497.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]    90   1e-15
ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating en...    88   4e-15
ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Rici...    84   8e-14
dbj|BAC42437.1| putative ubiquitin-conjugating enzyme [Arabidops...    83   1e-13

>ref|XP_002317497.1| predicted protein [Populus trichocarpa] gi|222860562|gb|EEE98109.1|
            predicted protein [Populus trichocarpa]
          Length = 480

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 55/242 (22%)
 Frame = +2

Query: 533  DDYEKLQSCFDNIDLPSGIEAPLPLL--LDTVKLKNRASTNQLVTSLTQLE--------- 679
            D+Y  LQS FDN+D+P G+EAP+P L   D    K    TN   TS  Q++         
Sbjct: 4    DEYSYLQSHFDNVDIPPGVEAPIPWLPNSDNNAKKTANGTNSFNTS-NQMQSNGGGSWSL 62

Query: 680  -----------------------VSHPHSVDPL----LASACLSRKKKNPAVEGGSSYSS 778
                                   VSH   V+         A  S+K+K+ +  G S+ + 
Sbjct: 63   KPAHASKKLSSGSGSSFHNPMDSVSHASGVNLSSPWSFPQAAQSKKEKSISQHGRSALNF 122

Query: 779  LLAESNPKNVTS--------------VETPHKIQHQTMPSST---DIYPTYDMLMEQDAG 907
               +S  K  TS              V  PH +    +  ++   + YPT          
Sbjct: 123  PPFQSKKKPATSNSSTDYGYAKHLGDVMLPHGVGPAHLGHTSLAPEFYPT--------PP 174

Query: 908  NCRTSSLARLDYEDILKRYESFKKFDTVQDHSDHYYSTQNPAMKQPQKNWVKKILEEWRI 1087
            +    +L  ++ +DIL++++ FK+FDTV+DHSDH+Y+++   MKQP K W K+I EEWRI
Sbjct: 175  SFAAGTLKNVNKDDILRKFQLFKRFDTVEDHSDHHYTSKGSLMKQPPKTWAKRIQEEWRI 234

Query: 1088 LE 1093
            LE
Sbjct: 235  LE 236


>emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]
          Length = 532

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 79/277 (28%), Positives = 116/277 (41%), Gaps = 10/277 (3%)
 Frame = +2

Query: 293  EGKVDSDKKTKGTIAISLA-----PCSVAQS-DSVDKVHSTKKVESNKGKDVVAIMPLKP 454
            + K+D D+  +    ++LA     P S A S DS D + S     S    D++ I     
Sbjct: 55   KSKIDCDETWQNQAQVALANDVRNPTSEAGSEDSPDPLKSFASGSS----DLININGFNS 110

Query: 455  GSVSQQNSVGSDSFTTDMYA----DGYVSEDDYEKLQSCFDNIDLPSGIEAPLPLLLDTV 622
                  +    D    D+      D ++ +DDY KLQ+ FDN+D+P G++A +P L D  
Sbjct: 111  DLSYHDDDAIDDDDDDDVSGYDDNDDFLYDDDYLKLQAQFDNVDIPPGVZASVPWLKDPT 170

Query: 623  KLKNRASTNQLVTSLTQLEVSHPHSVDPLLASACLSRKKKNPAVEGGSSYSSLLAESNPK 802
                                                  +K PAV   S   SL  +  P 
Sbjct: 171  P------------------------------------SEKMPAVVDTSPTPSLQGQCAP- 193

Query: 803  NVTSVETPHKIQHQTMPSSTDIYPTYDMLMEQDAGNCRTSSLARLDYEDILKRYESFKKF 982
             V S   P + + +T  +S+   P      +   GN           +D+L +Y  FK+F
Sbjct: 194  -VGSFSDPGEKETKTAATSSSTVPA-----QSGDGN----------QDDVLGKYLFFKQF 237

Query: 983  DTVQDHSDHYYSTQNPAMKQPQKNWVKKILEEWRILE 1093
            DTV+D SDH++S      +QP KNW KKI EEW+ILE
Sbjct: 238  DTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILE 274


>ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Vitis
            vinifera]
          Length = 511

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 79/277 (28%), Positives = 115/277 (41%), Gaps = 10/277 (3%)
 Frame = +2

Query: 293  EGKVDSDKKTKGTIAISLA-----PCSVAQS-DSVDKVHSTKKVESNKGKDVVAIMPLKP 454
            + K+D D+  +    ++LA     P S A S DS D + S     S    D++ I     
Sbjct: 55   KSKIDCDETWQNQAQVALANDVRNPTSEAGSEDSPDPLKSFASGSS----DLININGFNS 110

Query: 455  GSVSQQNSVGSDSFTTDMYA----DGYVSEDDYEKLQSCFDNIDLPSGIEAPLPLLLDTV 622
                  +    D    D+      D ++ +DDY KLQ+ FDN+D+P G+EA +P L D  
Sbjct: 111  DLSYHDDDAIDDDDDDDVSGYDDNDDFLYDDDYLKLQAQFDNVDIPPGVEASVPWLKDPT 170

Query: 623  KLKNRASTNQLVTSLTQLEVSHPHSVDPLLASACLSRKKKNPAVEGGSSYSSLLAESNPK 802
                                                  +K PAV   S   SL  +    
Sbjct: 171  P------------------------------------SEKMPAVVDTSPTPSLQGQC--A 192

Query: 803  NVTSVETPHKIQHQTMPSSTDIYPTYDMLMEQDAGNCRTSSLARLDYEDILKRYESFKKF 982
             V S   P + + +T  +S+   P      +   GN           +D+L +Y  FK+F
Sbjct: 193  RVGSFSDPGEKETKTAATSSSTVPA-----QSGDGN----------QDDVLGKYLFFKQF 237

Query: 983  DTVQDHSDHYYSTQNPAMKQPQKNWVKKILEEWRILE 1093
            DTV+D SDH++S      +QP KNW KKI EEW+ILE
Sbjct: 238  DTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILE 274


>ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
            gi|223528656|gb|EEF30672.1| ubiquitin conjugating enzyme,
            putative [Ricinus communis]
          Length = 647

 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 40/81 (49%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = +2

Query: 854  SSTDIY-PTYDMLMEQDAGNCRTSSLARLDYEDILKRYESFKKFDTVQDHSDHYYSTQNP 1030
            S ++ Y P Y      + G  RT  L  ++ +DIL +Y++FK+FDTV+DHSDH+Y+++  
Sbjct: 324  SHSEFYNPLYGGQNLSEEGVART--LKHVNEDDILSKYQNFKRFDTVEDHSDHHYASKGS 381

Query: 1031 AMKQPQKNWVKKILEEWRILE 1093
            ++KQP KNW KKI EEWRILE
Sbjct: 382  SVKQPPKNWAKKIQEEWRILE 402



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 51/174 (29%), Positives = 88/174 (50%)
 Frame = +2

Query: 194 LDDRALKSKAMAIEPKKVIDVDMDEDCNDEVFVEGKVDSDKKTKGTIAISLAPCSVAQSD 373
           L +  L +  +A+  ++VIDVD DED +D + ++  +D+  K K  I  S+    +A+  
Sbjct: 12  LFNTVLTTLPLAVVLREVIDVDNDEDSSDCMIIDATMDTKNKGKA-IEESVDDYLLAKDA 70

Query: 374 SVDKVHSTKKVESNKGKDVVAIMPLKPGSVSQQNSVGSDSFTTDMYADGYVSEDDYEKLQ 553
            VD +    K  S  G     I       V   NS   D+   D+ +D ++  D+Y  LQ
Sbjct: 71  MVDYLPYPSK-GSGPGSQKTVI-------VDGSNSDMLDNECIDITSDDFMDFDEYAYLQ 122

Query: 554 SCFDNIDLPSGIEAPLPLLLDTVKLKNRASTNQLVTSLTQLEVSHPHSVDPLLA 715
           + FDN+D+P G+E P+P LLD++       T + V     L+ ++  +++ L+A
Sbjct: 123 AHFDNVDIPPGVEVPIPCLLDSLH-----KTKKTVNESDSLDTTNQKNLNNLVA 171


>dbj|BAC42437.1| putative ubiquitin-conjugating enzyme [Arabidopsis thaliana]
            gi|29028948|gb|AAO64853.1| At1g53020 [Arabidopsis
            thaliana]
          Length = 543

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 3/305 (0%)
 Frame = +2

Query: 188  PPLDDRALKSKAMAIEPKKVIDVDMDEDCNDEVFVEGKVDSDKKTKGTIAISLAPCSVAQ 367
            PPL     +++       +VIDV+  E  N  V  +  V  DKK KG            +
Sbjct: 11   PPLIASGSRTRKPRKAVPEVIDVESYEFRNVGVVKDNNV-VDKKNKG------------K 57

Query: 368  SDSVDKVHSTKKVESNKGKDVVAIMPLKPGSVSQQNSVGSDSFTTDMYADGYVSEDDYEK 547
            +  VD          + G  ++ +          Q+  G  +     +A+  +  DDY  
Sbjct: 58   AIQVDSFSFNNVQSHHHGSSLLNLETF-------QDYYGHKNIPFSEFANQPIDVDDYSM 110

Query: 548  LQSCFDNIDLPSGIEAPLPLLLDTVKLKNRASTNQLVTSLTQL---EVSHPHSVDPLLAS 718
             Q   D  D+P+G E  +P  L++       S+  ++ S +      VS   +  P L  
Sbjct: 111  YQDVLDPEDVPAGAEVTVPWGLNSSSKGTAKSSISIMRSQSMKGYGTVSLATTNVPQLWD 170

Query: 719  ACLSRKKKNPAVEGGSSYSSLLAESNPKNVTSVETPHKIQHQTMPSSTDIYPTYDMLMEQ 898
              L ++  N A+    S+S++  ++    + +  TP+   +    SS+       +   Q
Sbjct: 171  YTLPQQ--NQAIYSSVSFSAVQPQTPDVVMVTNPTPNPFSYDASASSSHPIAAEPISSVQ 228

Query: 899  DAGNCRTSSLARLDYEDILKRYESFKKFDTVQDHSDHYYSTQNPAMKQPQKNWVKKILEE 1078
            D+ N R         E+ L+    FK+FDTV+D SDH+Y+++  + KQ  KNWVKK+  +
Sbjct: 229  DSSNARKLK------EEFLR---DFKRFDTVEDFSDHHYASKGKSSKQHSKNWVKKVQAD 279

Query: 1079 WRILE 1093
            W+ILE
Sbjct: 280  WKILE 284


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