BLASTX nr result

ID: Atractylodes22_contig00021046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021046
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    70   2e-10
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    67   1e-09
gb|AFK44336.1| unknown [Lotus japonicus]                               64   2e-08
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    62   4e-08
gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]    60   1e-07

>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = -2

Query: 242 VCKSWRSMISDPHFVKSHLSLSTSNNHYAHHRLIFN---TDSEIKSCPLYDVLYDNSVNA 72
           VCKSW S+I DP+F+K HL LS+ + H+ HHR+I +    +  +KSC L  +  + S   
Sbjct: 72  VCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSATTAEFHLKSCSLSSLFNNLSTVC 131

Query: 71  LELAHISEHLMNYFLIVGSCNGL 3
            EL +  ++   +  IVGSCNGL
Sbjct: 132 DELNYPVKNKFRHDGIVGSCNGL 154


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
 Frame = -2

Query: 242 VCKSWRSMISDPHFVKSHLSLSTSNNHYAHHRLIFN---TDSEIKSCPLYDVLYDNSVNA 72
           VCKSW S+ISDP+F+K HL LS+   H+ HHR+I +    +  +KSC L   L++N  + 
Sbjct: 72  VCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSATTAEFHLKSCSL-SSLFNNPSST 130

Query: 71  L--ELAHISEHLMNYFLIVGSCNGL 3
           +  +L +  ++   +  IVGSCNGL
Sbjct: 131 VCDDLNYPVKNKFRHDGIVGSCNGL 155


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = -2

Query: 242 VCKSWRSMISDPHFVKSHLSLSTSNNHYAHHRLIFN---TDSEIKSCPLYDVLYDNSVNA 72
           VCKSW  +ISDP+F+K HL LS  +  + HHR+I +    +  +KSC +  +    S   
Sbjct: 86  VCKSWMLLISDPYFIKKHLHLSKQSTLFNHHRIILSATTAEFHLKSCSVSSLFNSTSTVC 145

Query: 71  LELAHISEHLMNYFLIVGSCNGL 3
            +L +  ++   +  IVGSCNGL
Sbjct: 146 EDLNYPVKNKYRHDGIVGSCNGL 168


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -2

Query: 242 VCKSWRSMISDPHFVKSHLSLSTSNNHYAHHRLIF-NTDSEIKSCPLYDVLYDNSVNALE 66
           V KSW  +IS P FVK H+ L+ ++  Y +HRLIF NT+++ K CPL   L+ N     E
Sbjct: 34  VSKSWLQLISSPAFVKKHIKLTANDKGYIYHRLIFRNTNNDFKFCPL-PPLFTNQQLIEE 92

Query: 65  LAHISEHLMNYFL---IVGSCNGL 3
           + HI   +    L   IVGS NGL
Sbjct: 93  ILHIDSPIERTTLSTHIVGSVNGL 116


>gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 327

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
 Frame = -2

Query: 242 VCKSWRSMISDPHFVKSHLSLSTSNNHYAHHRLIF-NTDSEIKSCPLYDVLYDNSVNALE 66
           V KSW  +IS P FVK+H+ L+  +  Y +HRLIF NT+ + K CPL   L+       E
Sbjct: 35  VSKSWLQLISSPAFVKNHIKLTADDKGYIYHRLIFRNTNDDFKFCPL-PPLFTQQQLIKE 93

Query: 65  LAHISEHLMNYFL---IVGSCNGL 3
           L HI   +    L   IVGS NGL
Sbjct: 94  LYHIDSPIERTTLSTHIVGSVNGL 117


Top