BLASTX nr result

ID: Atractylodes22_contig00021026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021026
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]      86   4e-15
gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]     80   2e-13
gb|AAQ72578.1| resistance protein RGC2 [Lactuca sativa]                77   1e-12
gb|AAD03672.1| resistance protein candidate RGC2K [Lactuca sativa]     76   3e-12
gb|AAC02203.1| resistance protein candidate [Lactuca sativa]           74   2e-11

>gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]
          Length = 1923

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/60 (68%), Positives = 48/60 (80%)
 Frame = +2

Query: 98  RKKSTFDWTDHPIPLGKVDSMKASTSTPSSHPNEFKSSELTFKKALEALQADHKSHMIAL 277
           RK S   WTDHPIPLGKVDSMKAS STPS++ ++FKS E  F +AL+AL  +HKSHMIAL
Sbjct: 117 RKHSLIIWTDHPIPLGKVDSMKASVSTPSTYHDDFKSREQIFTEALQALHPNHKSHMIAL 176


>gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]
          Length = 1758

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/74 (54%), Positives = 54/74 (72%)
 Frame = +2

Query: 56  KEGLQDYLRDQKSHRKKSTFDWTDHPIPLGKVDSMKASTSTPSSHPNEFKSSELTFKKAL 235
           +E L+  +  + + R+ S   WTDHPIPLGKVDSMKAS ST S+  N+F+S E TF +AL
Sbjct: 103 REALKLIVEIESATRQHSLITWTDHPIPLGKVDSMKASMSTASTDYNDFQSREKTFTQAL 162

Query: 236 EALQADHKSHMIAL 277
           +AL+ ++ SHMIAL
Sbjct: 163 KALEPNNASHMIAL 176


>gb|AAQ72578.1| resistance protein RGC2 [Lactuca sativa]
          Length = 1285

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = +2

Query: 98  RKKSTFDWTDHPIPLGKVDSMKASTSTPSSHPNEFKSSELTFKKALEALQADHKSHMIAL 277
           R+    +W DHPIP G+V SMK+STST S+  N+F+S ELTF KAL+AL  +HKSHMIAL
Sbjct: 127 RRYKEINWADHPIPPGRVHSMKSSTSTLSTKHNDFQSRELTFTKALKALDLNHKSHMIAL 186


>gb|AAD03672.1| resistance protein candidate RGC2K [Lactuca sativa]
          Length = 1715

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/60 (60%), Positives = 47/60 (78%)
 Frame = +2

Query: 98  RKKSTFDWTDHPIPLGKVDSMKASTSTPSSHPNEFKSSELTFKKALEALQADHKSHMIAL 277
           ++ S  +WTD  +PLG+ DS KASTSTPSS  N+F+S E TF+KALEAL ++H SHM+AL
Sbjct: 118 KQLSRIEWTDDSVPLGRNDSTKASTSTPSSDYNDFESREHTFRKALEALGSNHTSHMVAL 177


>gb|AAC02203.1| resistance protein candidate [Lactuca sativa]
          Length = 1139

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = +2

Query: 98  RKKSTFDWTDHPIPLGKVDSMKASTSTPSS-HPNEFKSSELTFKKALEALQADHKSHMIA 274
           R+ S   W DH IPLG++DS KASTS PS+ H +EF+S E TF +AL AL  +HKSHMIA
Sbjct: 117 REHSIIIWNDHSIPLGRIDSTKASTSIPSTDHHDEFQSREQTFTEALNALDPNHKSHMIA 176

Query: 275 L 277
           L
Sbjct: 177 L 177


Top