BLASTX nr result

ID: Atractylodes22_contig00021004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021004
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   203   1e-50
emb|CBI30135.3| unnamed protein product [Vitis vinifera]              200   9e-50
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi...   200   9e-50
ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47

>ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  204 bits (519), Expect = 6e-51
 Identities = 100/137 (72%), Positives = 117/137 (85%)
 Frame = +2

Query: 2   DLIAKVHGLQAAETYIEKVPESFKGEVIYRTLLANCVRSMHTAKAEKVFNKMKDLNFPIT 181
           DLIAKV GL  AE YI+K+P+SFKGEVIYRTLLANCV   +  KAE+VFNKM+DL FPIT
Sbjct: 163 DLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPIT 222

Query: 182 PFACNQLLLLYMRTNKKKVGDVLLLMEEENVKPNLVTYTILIDIKGQTNDIDGMEKIVET 361
           PFACNQLLLLY R +KKK+ DVLLLME+ENVKP+L TY ILID KGQ+ND+ GM++IVET
Sbjct: 223 PFACNQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVET 282

Query: 362 MKAEDIEPDAKVQALLA 412
           MKAE IEPD + QA++A
Sbjct: 283 MKAEGIEPDIRTQAIMA 299


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/136 (70%), Positives = 118/136 (86%)
 Frame = +2

Query: 2   DLIAKVHGLQAAETYIEKVPESFKGEVIYRTLLANCVRSMHTAKAEKVFNKMKDLNFPIT 181
           DLIAK+HGL  AE YIEK+PESF+GE+IYRTLLANCV   +  KAE++FNKMKDL FP+T
Sbjct: 232 DLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLT 291

Query: 182 PFACNQLLLLYMRTNKKKVGDVLLLMEEENVKPNLVTYTILIDIKGQTNDIDGMEKIVET 361
           PFACNQLLLLY RT+KKK+ DVLLLME+ENVKP+ +T+ ILID+KGQ+NDIDGM++IV+ 
Sbjct: 292 PFACNQLLLLYKRTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQIVDQ 351

Query: 362 MKAEDIEPDAKVQALL 409
           M+AE IEPD   +A+L
Sbjct: 352 MRAEGIEPDNYTKAVL 367


>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/136 (72%), Positives = 118/136 (86%)
 Frame = +2

Query: 2   DLIAKVHGLQAAETYIEKVPESFKGEVIYRTLLANCVRSMHTAKAEKVFNKMKDLNFPIT 181
           DLIAKV GLQ AE YIEK+P+SF+GE++YRTLLANCV + +  KAE+VFNKMKDL FPIT
Sbjct: 232 DLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPIT 291

Query: 182 PFACNQLLLLYMRTNKKKVGDVLLLMEEENVKPNLVTYTILIDIKGQTNDIDGMEKIVET 361
            FACNQLLLLY R +KKK+ DVLLLME+E+VKP+L TY +LID KGQ+NDI GME+IVET
Sbjct: 292 TFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVET 351

Query: 362 MKAEDIEPDAKVQALL 409
           MKAE IEP+ +VQ++L
Sbjct: 352 MKAEGIEPNLQVQSIL 367


>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Vitis vinifera]
          Length = 587

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/136 (72%), Positives = 118/136 (86%)
 Frame = +2

Query: 2   DLIAKVHGLQAAETYIEKVPESFKGEVIYRTLLANCVRSMHTAKAEKVFNKMKDLNFPIT 181
           DLIAKV GLQ AE YIEK+P+SF+GE++YRTLLANCV + +  KAE+VFNKMKDL FPIT
Sbjct: 195 DLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPIT 254

Query: 182 PFACNQLLLLYMRTNKKKVGDVLLLMEEENVKPNLVTYTILIDIKGQTNDIDGMEKIVET 361
            FACNQLLLLY R +KKK+ DVLLLME+E+VKP+L TY +LID KGQ+NDI GME+IVET
Sbjct: 255 TFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVET 314

Query: 362 MKAEDIEPDAKVQALL 409
           MKAE IEP+ +VQ++L
Sbjct: 315 MKAEGIEPNLQVQSIL 330


>ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|222867249|gb|EEF04380.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  191 bits (485), Expect = 5e-47
 Identities = 97/137 (70%), Positives = 112/137 (81%)
 Frame = +2

Query: 2   DLIAKVHGLQAAETYIEKVPESFKGEVIYRTLLANCVRSMHTAKAEKVFNKMKDLNFPIT 181
           DLIAKV GLQ AE YIEK+P+S KGEVIYRTLLANCV + +  KA +VFNKMKDL  PIT
Sbjct: 80  DLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMKDLELPIT 139

Query: 182 PFACNQLLLLYMRTNKKKVGDVLLLMEEENVKPNLVTYTILIDIKGQTNDIDGMEKIVET 361
            F+ NQLLLLY R +KKK+ DVLL ME+ENVKP+L TY +LID KGQ+NDI GME+I ET
Sbjct: 140 LFSYNQLLLLYKRHDKKKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIAGMEQIAET 199

Query: 362 MKAEDIEPDAKVQALLA 412
           MKAE IEPD K QA++A
Sbjct: 200 MKAEGIEPDIKTQAIMA 216


Top