BLASTX nr result

ID: Atractylodes22_contig00020985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020985
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   135   5e-30
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   134   8e-30
ref|XP_004169150.1| PREDICTED: zinc finger CCCH domain-containin...   128   4e-28

>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/140 (50%), Positives = 84/140 (60%), Gaps = 12/140 (8%)
 Frame = +3

Query: 21  VARPPLLPGSYLPGTYGPMLVPPGMIPFPGWNPYHQAPVHPAASPNAQXXXXXXXXXXXX 200
           VARPPLLPGSY+ G YGP+L+ P ++P+P WNPY  APV P ASPN Q            
Sbjct: 208 VARPPLLPGSYVQGPYGPVLLSPSVVPYPSWNPY-PAPVSPVASPNTQ------------ 254

Query: 201 XXXXXXXXXXAQPIVGAIPGYAMSQLSPSAPSY------------PSTKIQKEHAFPERP 344
                       P VG+   Y MS LSPSAP+Y            PS+  QKEH FPERP
Sbjct: 255 ------------PAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKEHLFPERP 302

Query: 345 GEPECQFYMKTGECKFGSSC 404
           G+PECQ+Y+KTG+CKF SSC
Sbjct: 303 GQPECQYYIKTGDCKFRSSC 322


>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/140 (50%), Positives = 85/140 (60%), Gaps = 12/140 (8%)
 Frame = +3

Query: 21  VARPPLLPGSYLPGTYGPMLVPPGMIPFPGWNPYHQAPVHPAASPNAQXXXXXXXXXXXX 200
           VARPPLLPGSY+ G YGP+L+ P ++P+P W+PY  APV P ASPNAQ            
Sbjct: 208 VARPPLLPGSYVQGPYGPVLLSPSLVPYPSWSPY-PAPVSPVASPNAQ------------ 254

Query: 201 XXXXXXXXXXAQPIVGAIPGYAMSQLSPSAPSY------------PSTKIQKEHAFPERP 344
                       P VG+   Y +S LSPSAP+Y            PS+  QKEH FPERP
Sbjct: 255 ------------PAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQKEHVFPERP 302

Query: 345 GEPECQFYMKTGECKFGSSC 404
           G+PECQ+YMKTG+CKF SSC
Sbjct: 303 GQPECQYYMKTGDCKFESSC 322


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  135 bits (339), Expect = 5e-30
 Identities = 69/140 (49%), Positives = 84/140 (60%), Gaps = 12/140 (8%)
 Frame = +3

Query: 21  VARPPLLPGSYLPGTYGPMLVPPGMIPFPGWNPYHQAPVHPAASPNAQXXXXXXXXXXXX 200
           VARPPLLP SY+ G Y P+L+PPGM+PFPGW+ Y  APV P ASP+ Q            
Sbjct: 250 VARPPLLPSSYIHGPYSPVLIPPGMVPFPGWSHY-PAPVSPVASPSTQ------------ 296

Query: 201 XXXXXXXXXXAQPIVGAIPGYAMSQLSPSAPSY------------PSTKIQKEHAFPERP 344
                       P VG+   Y ++ LSPSAP+Y            PS+  QKE  FPERP
Sbjct: 297 ------------PTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERP 344

Query: 345 GEPECQFYMKTGECKFGSSC 404
           G+PECQ+YM+TG+CKFGSSC
Sbjct: 345 GQPECQYYMRTGDCKFGSSC 364


>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/140 (49%), Positives = 83/140 (59%), Gaps = 12/140 (8%)
 Frame = +3

Query: 21  VARPPLLPGSYLPGTYGPMLVPPGMIPFPGWNPYHQAPVHPAASPNAQXXXXXXXXXXXX 200
           VARPPLLP SY  G Y P+L+PPGM+PFPGW+ Y  APV P ASP+ Q            
Sbjct: 210 VARPPLLPSSYFHGPYSPVLIPPGMVPFPGWSHY-PAPVSPVASPSTQ------------ 256

Query: 201 XXXXXXXXXXAQPIVGAIPGYAMSQLSPSAPSY------------PSTKIQKEHAFPERP 344
                       P VG+   Y ++ LSPSAP+Y            PS+  QKE  FPERP
Sbjct: 257 ------------PTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERP 304

Query: 345 GEPECQFYMKTGECKFGSSC 404
           G+PECQ+YM+TG+CKFGSSC
Sbjct: 305 GQPECQYYMRTGDCKFGSSC 324


>ref|XP_004169150.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like,
           partial [Cucumis sativus]
          Length = 403

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/139 (47%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
 Frame = +3

Query: 21  VARPPLLPGSYLPGTYGPMLVPPGMIPFPGWNPYHQAPVHPAASPNAQXXXXXXXXXXXX 200
           +ARP LL   Y+PG YGPMLV PG++ FP W+PY  AP+ P ASP+AQ            
Sbjct: 133 LARPSLLSNPYVPGPYGPMLVSPGVVQFPSWSPY-PAPMSPVASPSAQ------------ 179

Query: 201 XXXXXXXXXXAQPIVGAIPGYAMSQLSPSAPSY-----------PSTKIQKEHAFPERPG 347
                       P VG+ P Y M+ +SPSA  +           PS+  QKEH+FPERPG
Sbjct: 180 ------------PSVGSGPLYGMAHVSPSASGFAGSYQPMPSTGPSSTSQKEHSFPERPG 227

Query: 348 EPECQFYMKTGECKFGSSC 404
           +PECQ+YM+TG+CKFGSSC
Sbjct: 228 QPECQYYMRTGDCKFGSSC 246


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