BLASTX nr result

ID: Atractylodes22_contig00020953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020953
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43955.1|AC012188_32 Contains similarity to an unknown prot...   107   8e-22
ref|NP_563953.1| uncharacterized protein [Arabidopsis thaliana] ...   107   8e-22
gb|AAM61457.1| unknown [Arabidopsis thaliana]                         107   8e-22
ref|XP_002892815.1| hypothetical protein ARALYDRAFT_471628 [Arab...   106   2e-21
gb|ABE66392.1| tobamovirus multiplication 3 [Striga asiatica]         105   3e-21

>gb|AAF43955.1|AC012188_32 Contains similarity to an unknown protein from Arabidopsis thaliana
           gb|AC005936.2. EST gb|AI997527 comes from this gene
           [Arabidopsis thaliana]
          Length = 343

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = -2

Query: 236 EIYYQARTVSTDGLRPAFFTINGIVYAIQIALWLILWWKPIHILVVISKVFFAGVSXXXX 57
           EIYYQAR VSTDGLRP+FFTIN +VY IQIALWL+LWWKP+H++V+ISK+FFAGVS    
Sbjct: 180 EIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAA 239

Query: 56  XXXXXXXXXXXXXLQRFP 3
                        LQRFP
Sbjct: 240 LGFLLYGGRLFLMLQRFP 257


>ref|NP_563953.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30683857|ref|NP_849661.1| uncharacterized protein
           [Arabidopsis thaliana] gi|15706301|dbj|BAB68339.1| THH1
           [Arabidopsis thaliana] gi|56381923|gb|AAV85680.1|
           At1g14530 [Arabidopsis thaliana]
           gi|60543343|gb|AAX22269.1| At1g14530 [Arabidopsis
           thaliana] gi|332191055|gb|AEE29176.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332191056|gb|AEE29177.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 293

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = -2

Query: 236 EIYYQARTVSTDGLRPAFFTINGIVYAIQIALWLILWWKPIHILVVISKVFFAGVSXXXX 57
           EIYYQAR VSTDGLRP+FFTIN +VY IQIALWL+LWWKP+H++V+ISK+FFAGVS    
Sbjct: 130 EIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAA 189

Query: 56  XXXXXXXXXXXXXLQRFP 3
                        LQRFP
Sbjct: 190 LGFLLYGGRLFLMLQRFP 207


>gb|AAM61457.1| unknown [Arabidopsis thaliana]
          Length = 285

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = -2

Query: 236 EIYYQARTVSTDGLRPAFFTINGIVYAIQIALWLILWWKPIHILVVISKVFFAGVSXXXX 57
           EIYYQAR VSTDGLRP+FFTIN +VY IQIALWL+LWWKP+H++V+ISK+FFAGVS    
Sbjct: 122 EIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAA 181

Query: 56  XXXXXXXXXXXXXLQRFP 3
                        LQRFP
Sbjct: 182 LGFLLYGGRLFLMLQRFP 199


>ref|XP_002892815.1| hypothetical protein ARALYDRAFT_471628 [Arabidopsis lyrata subsp.
           lyrata] gi|297338657|gb|EFH69074.1| hypothetical protein
           ARALYDRAFT_471628 [Arabidopsis lyrata subsp. lyrata]
          Length = 295

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = -2

Query: 236 EIYYQARTVSTDGLRPAFFTINGIVYAIQIALWLILWWKPIHILVVISKVFFAGVSXXXX 57
           EIYYQAR VSTDGLRP+FFTIN +VY IQIALWL+LWWKP+H++V+IS++FFAGVS    
Sbjct: 132 EIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISRMFFAGVSLFAA 191

Query: 56  XXXXXXXXXXXXXLQRFP 3
                        LQRFP
Sbjct: 192 LGFLLYGGRLFLMLQRFP 209


>gb|ABE66392.1| tobamovirus multiplication 3 [Striga asiatica]
          Length = 178

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/78 (65%), Positives = 58/78 (74%)
 Frame = -2

Query: 236 EIYYQARTVSTDGLRPAFFTINGIVYAIQIALWLILWWKPIHILVVISKVFFAGVSXXXX 57
           EIYYQAR VSTDGLRP+F+TING+VYAIQI LWLILWWKPI IL+++SK+FFAGVS    
Sbjct: 65  EIYYQARAVSTDGLRPSFYTINGVVYAIQIILWLILWWKPIRILMILSKMFFAGVSLFAA 124

Query: 56  XXXXXXXXXXXXXLQRFP 3
                        LQRFP
Sbjct: 125 LGFLLYGGRLFLMLQRFP 142


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