BLASTX nr result

ID: Atractylodes22_contig00020945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020945
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   319   2e-85
ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus ...   311   6e-83
ref|XP_003519790.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   305   3e-81
ref|NP_564272.1| uncharacterized protein [Arabidopsis thaliana] ...   305   5e-81
gb|AAK43960.1|AF370145_1 unknown protein [Arabidopsis thaliana]       305   5e-81

>ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 601

 Score =  319 bits (818), Expect = 2e-85
 Identities = 150/199 (75%), Positives = 171/199 (85%), Gaps = 6/199 (3%)
 Frame = -3

Query: 580 HCAIRARDECNWVSFMDVDEFYYFPRLTETG------FMARDSLKTLVSNYTSSSSIGEL 419
           HCA+RARDECNWV FMDVDEF+YFP  T         F  ++SL+TLV+N+ SS++IGE+
Sbjct: 385 HCALRARDECNWVGFMDVDEFFYFPFPTHRRGSNKLIFRGQNSLRTLVANF-SSTTIGEI 443

Query: 418 RTACHSFGPSGLSSPPKQGVTVGYTCRLQSPERHKSIIRPDALDTTLMNVVHHFHLREGF 239
           RTACHS+GPSGL+S P QGVTVGYTCRLQSPERHKSI+RPD LD TL+NVVHHF LR+GF
Sbjct: 444 RTACHSYGPSGLNSLPSQGVTVGYTCRLQSPERHKSIVRPDVLDRTLLNVVHHFRLRKGF 503

Query: 238 GYEDVRQSTAVINHYKYQVWEAFRAKFYRRVATYVADWQDNHNEGSRDRAPGLGTEAIEP 59
            Y ++ QST VINHYKYQVWEAFRAKF+RRVATYVADWQ+  NEGS+DRAPGLGTEAIEP
Sbjct: 504 KYLNLPQSTGVINHYKYQVWEAFRAKFFRRVATYVADWQEKENEGSKDRAPGLGTEAIEP 563

Query: 58  PDWRLRFCEVWDTGLRDFV 2
           P W L+FCEVWDTGLRDFV
Sbjct: 564 PKWPLQFCEVWDTGLRDFV 582


>ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|325530317|sp|B9S2H4.1|Y232_RICCO RecName:
           Full=UPF0392 protein RCOM_0530710
           gi|223540685|gb|EEF42248.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 578

 Score =  311 bits (797), Expect = 6e-83
 Identities = 136/193 (70%), Positives = 166/193 (86%)
 Frame = -3

Query: 580 HCAIRARDECNWVSFMDVDEFYYFPRLTETGFMARDSLKTLVSNYTSSSSIGELRTACHS 401
           HCA+RAR EC W+ F DVDEF+Y PR      +  +SL+TLV+NY+ SS+  E+RT CHS
Sbjct: 367 HCALRARSECKWLGFFDVDEFFYLPRHRGQDMLGENSLRTLVANYSDSSTYAEIRTICHS 426

Query: 400 FGPSGLSSPPKQGVTVGYTCRLQSPERHKSIIRPDALDTTLMNVVHHFHLREGFGYEDVR 221
           FGPSGL+S P QGVTVGYTCRLQ+PERHKSI+RP+ LDTTL+NVVHHF L+EG+ Y +V 
Sbjct: 427 FGPSGLTSAPSQGVTVGYTCRLQAPERHKSIVRPELLDTTLLNVVHHFKLKEGYRYLNVP 486

Query: 220 QSTAVINHYKYQVWEAFRAKFYRRVATYVADWQDNHNEGSRDRAPGLGTEAIEPPDWRLR 41
           +STAV+NHYKYQVW+ F+AKF+RRV+TYVA+WQ++ N+GS+DRAPGLGT AIEPPDWRLR
Sbjct: 487 ESTAVVNHYKYQVWDTFKAKFFRRVSTYVANWQEDQNQGSKDRAPGLGTVAIEPPDWRLR 546

Query: 40  FCEVWDTGLRDFV 2
           FCEVWDTGL+DFV
Sbjct: 547 FCEVWDTGLKDFV 559


>ref|XP_003519790.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 605

 Score =  305 bits (782), Expect = 3e-81
 Identities = 134/197 (68%), Positives = 167/197 (84%), Gaps = 4/197 (2%)
 Frame = -3

Query: 580 HCAIRARDECNWVSFMDVDEFYYFP----RLTETGFMARDSLKTLVSNYTSSSSIGELRT 413
           HCA+RAR+EC WV F DVDEF+YFP    +    G    + L+++V+N++SS  IGE+RT
Sbjct: 390 HCALRAREECKWVGFFDVDEFFYFPSEFRQPLGEGVPGENYLRSVVANFSSSKFIGEIRT 449

Query: 412 ACHSFGPSGLSSPPKQGVTVGYTCRLQSPERHKSIIRPDALDTTLMNVVHHFHLREGFGY 233
           ACHSFGPSGL SPPKQGVT+GYTCRLQSPERHKSI+RPD LD +L+NVVHHF L+EGF Y
Sbjct: 450 ACHSFGPSGLKSPPKQGVTLGYTCRLQSPERHKSIVRPDLLDISLLNVVHHFQLKEGFRY 509

Query: 232 EDVRQSTAVINHYKYQVWEAFRAKFYRRVATYVADWQDNHNEGSRDRAPGLGTEAIEPPD 53
            ++ + TA++NHYKYQVWE F+AKF+RRVATYV DWQ++ N+GS+DRAPGLGTEAIEPP+
Sbjct: 510 HNMPEGTAIVNHYKYQVWETFKAKFFRRVATYVVDWQEDQNKGSKDRAPGLGTEAIEPPN 569

Query: 52  WRLRFCEVWDTGLRDFV 2
           WR +FCEVWDTGL++F+
Sbjct: 570 WRQQFCEVWDTGLKNFL 586


>ref|NP_564272.1| uncharacterized protein [Arabidopsis thaliana]
           gi|325530321|sp|Q94K98.2|Y1720_ARATH RecName:
           Full=UPF0392 protein At1g27200
           gi|8778872|gb|AAF79871.1|AC000348_24 T7N9.26
           [Arabidopsis thaliana] gi|23297605|gb|AAN12989.1|
           unknown protein [Arabidopsis thaliana]
           gi|332192672|gb|AEE30793.1| uncharacterized protein
           [Arabidopsis thaliana] gi|385137870|gb|AFI41196.1|
           DUF23/GT0, partial [Arabidopsis thaliana]
          Length = 575

 Score =  305 bits (780), Expect = 5e-81
 Identities = 133/193 (68%), Positives = 162/193 (83%)
 Frame = -3

Query: 580 HCAIRARDECNWVSFMDVDEFYYFPRLTETGFMARDSLKTLVSNYTSSSSIGELRTACHS 401
           HCA+RA++ECNWV F DVDEFYYFP     G  ++++LK+LVSNYTS   +GE+RT CHS
Sbjct: 363 HCAVRAKEECNWVGFFDVDEFYYFPTHRSQGLPSKNALKSLVSNYTSWDLVGEIRTDCHS 422

Query: 400 FGPSGLSSPPKQGVTVGYTCRLQSPERHKSIIRPDALDTTLMNVVHHFHLREGFGYEDVR 221
           +GPSGL+S P QGVTVGYTCR  +PERHKSIIRP+ L ++L+N VHHF L+EG G+  + 
Sbjct: 423 YGPSGLTSVPSQGVTVGYTCRQANPERHKSIIRPELLTSSLLNEVHHFQLKEGVGHMSLV 482

Query: 220 QSTAVINHYKYQVWEAFRAKFYRRVATYVADWQDNHNEGSRDRAPGLGTEAIEPPDWRLR 41
           +S AV+NHYKYQVW+ F+AKFYRRVATYV DWQ+N N+GS+DRAPGLGTEAIEPPDW+ R
Sbjct: 483 ESVAVVNHYKYQVWDTFKAKFYRRVATYVVDWQENQNQGSKDRAPGLGTEAIEPPDWKRR 542

Query: 40  FCEVWDTGLRDFV 2
           FCEVWDTGL+D V
Sbjct: 543 FCEVWDTGLKDLV 555


>gb|AAK43960.1|AF370145_1 unknown protein [Arabidopsis thaliana]
          Length = 575

 Score =  305 bits (780), Expect = 5e-81
 Identities = 133/193 (68%), Positives = 162/193 (83%)
 Frame = -3

Query: 580 HCAIRARDECNWVSFMDVDEFYYFPRLTETGFMARDSLKTLVSNYTSSSSIGELRTACHS 401
           HCA+RA++ECNWV F DVDEFYYFP     G  ++++LK+LVSNYTS   +GE+RT CHS
Sbjct: 363 HCAVRAKEECNWVGFFDVDEFYYFPTHRSQGLPSKNALKSLVSNYTSWDLVGEIRTDCHS 422

Query: 400 FGPSGLSSPPKQGVTVGYTCRLQSPERHKSIIRPDALDTTLMNVVHHFHLREGFGYEDVR 221
           +GPSGL+S P QGVTVGYTCR  +PERHKSIIRP+ L ++L+N VHHF L+EG G+  + 
Sbjct: 423 YGPSGLTSVPSQGVTVGYTCRQANPERHKSIIRPELLTSSLLNEVHHFQLKEGVGHMSLV 482

Query: 220 QSTAVINHYKYQVWEAFRAKFYRRVATYVADWQDNHNEGSRDRAPGLGTEAIEPPDWRLR 41
           +S AV+NHYKYQVW+ F+AKFYRRVATYV DWQ+N N+GS+DRAPGLGTEAIEPPDW+ R
Sbjct: 483 ESVAVVNHYKYQVWDTFKAKFYRRVATYVVDWQENQNQGSKDRAPGLGTEAIEPPDWKRR 542

Query: 40  FCEVWDTGLRDFV 2
           FCEVWDTGL+D V
Sbjct: 543 FCEVWDTGLKDLV 555


Top