BLASTX nr result

ID: Atractylodes22_contig00020899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020899
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   132   3e-29
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,...   124   1e-26
ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/78 (79%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   QRGIDPDVTSYSIVLHVYSRAHKPGLTLEKLKMMKDKGIQPTLASYTSVVKCLCSCGRLQ 182
           Q+GI+PDVTSYSIV+HVYSRAHKP LTL+KL+MMKDKGI PT+A+YTSVVKCLCSCGRL+
Sbjct: 295 QKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLE 354

Query: 183 DAEELLDEMVHHGVTPSA 236
           DAEEL+ +MV  GV+PSA
Sbjct: 355 DAEELVSDMVKDGVSPSA 372


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/78 (79%), Positives = 72/78 (92%)
 Frame = +3

Query: 3   QRGIDPDVTSYSIVLHVYSRAHKPGLTLEKLKMMKDKGIQPTLASYTSVVKCLCSCGRLQ 182
           Q GI+PDVTSYSIV+HVYSRAHKP LTL+KL+MMKDKGI PT+A+YTSVVKCLCSCGRL+
Sbjct: 295 QXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLE 354

Query: 183 DAEELLDEMVHHGVTPSA 236
           DAEEL+ +MV  GV+PSA
Sbjct: 355 DAEELVSDMVKDGVSPSA 372


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/78 (74%), Positives = 72/78 (92%)
 Frame = +3

Query: 3   QRGIDPDVTSYSIVLHVYSRAHKPGLTLEKLKMMKDKGIQPTLASYTSVVKCLCSCGRLQ 182
           +RGI+PDVTS+SIVLHVYSRAHKP LTL+KLK+MK+KGI P++ +YTSVVKCLCSCGR++
Sbjct: 318 ERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIE 377

Query: 183 DAEELLDEMVHHGVTPSA 236
           DAEELL EMV +GV+ +A
Sbjct: 378 DAEELLGEMVRNGVSRTA 395


>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 511

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/78 (70%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   QRGIDPDVTSYSIVLHVYSRAHKPGLTLEKLKMMKDKGIQPTLASYTSVVKCLCSCGRLQ 182
           Q+GI+PDVTS+SI+LHVYSRAHKP LT++KLK+M++ GI PT+A+YTSV+KCLCSCGR+ 
Sbjct: 281 QKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRID 340

Query: 183 DAEELLDEMVHHGVTPSA 236
           DAEELL++MV +GV+P+A
Sbjct: 341 DAEELLEQMVRNGVSPNA 358


>ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
           gi|449523938|ref|XP_004168980.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
          Length = 506

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/77 (71%), Positives = 69/77 (89%)
 Frame = +3

Query: 3   QRGIDPDVTSYSIVLHVYSRAHKPGLTLEKLKMMKDKGIQPTLASYTSVVKCLCSCGRLQ 182
           +RGI+PDVTS+SIVLHVYSRAHKP L+L+KLK MK+ GI PT+A+YTSV+KCLCSCGRL+
Sbjct: 276 KRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLE 335

Query: 183 DAEELLDEMVHHGVTPS 233
           D E L++EMV  G++PS
Sbjct: 336 DGENLIEEMVRSGISPS 352


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