BLASTX nr result

ID: Atractylodes22_contig00020868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020868
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus tric...    67   2e-09
ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...    62   6e-08
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]    62   6e-08
ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vi...    60   2e-07

>ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1203

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
 Frame = -2

Query: 308  QTLKEFCIDGTAITKLPSFVYSPCNLQVLRIGPHGRIQSRR-----WTPISQPSCVPSKI 144
            + L E  + GTAI + P  ++S  NL++L    HG  +S R     W  +  P  +P K 
Sbjct: 808  ECLNELDVSGTAIREPPVSIFSLKNLKILSF--HGCAESSRSTTNIWQRLMFP-LMPGKR 864

Query: 143  QHSRSLVIPSLVGLCFLRELRLGNCNISE--VPNSIGGLSCLQSLDLS 6
             +S SLV+PSL GL  L  L L NCN+ E  VPN IG LS L+ L+LS
Sbjct: 865  ANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLS 912


>ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|222834747|gb|EEE73210.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
 Frame = -2

Query: 308 QTLKEFCIDGTAITKLPSFVYSPCNLQVLRIGPHGRIQSRR-----WTPISQPSCVPSKI 144
           + L E  + GTAI + P  ++S  NL++L    HG  +S R     W  +  P  +P K 
Sbjct: 135 ECLNELDVSGTAIREPPVSIFSLKNLKILSF--HGCAESSRSTTNIWQRLMFP-LMPGKR 191

Query: 143 QHSRSLVIPSLVGLCFLRELRLGNCNISE--VPNSIGGLSCLQSLDLS 6
            +S SLV+PSL GL  L  L L NCN+ E  VPN IG LS L+ L+LS
Sbjct: 192 ANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLS 239


>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
 Frame = -2

Query: 308  QTLKEFCIDGTAITKLPSFVYSPCNLQVLRIGPHGRIQSRRWTPISQPSCVPSKIQHSRS 129
            Q L +   DGT + + PS +    NL++L  G    + S  W+ +     +P K   +  
Sbjct: 798  QCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIG 857

Query: 128  LVIPSLVGLCFLRELRLGNCNISE--VPNSIGGLSCLQSLDLS 6
            L +PSL GLC LREL + +CN+ E  VP  I  LS L++L+LS
Sbjct: 858  LQLPSLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLS 900


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
 Frame = -2

Query: 308  QTLKEFCIDGTAITKLPSFVYSPCNLQVLRIGPHGRIQSRRWTPISQPSCVPSKIQHSRS 129
            Q L +   DGT + + PS +    NL++L  G    + S  W+ +     +P K   +  
Sbjct: 766  QCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIG 825

Query: 128  LVIPSLVGLCFLRELRLGNCNISE--VPNSIGGLSCLQSLDLS 6
            L +PSL GLC LREL + +CN+ E  VP  I  LS L++L+LS
Sbjct: 826  LQLPSLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLS 868


>ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
 Frame = -2

Query: 308  QTLKEFCIDGTAITKLPSFVYSPCNLQVLRI-----GPHGRIQSRRWTPISQPSCVPSKI 144
            + L E   DG+A+ + PS +    NL+VL        P  R  SR W+ +    C+  +I
Sbjct: 815  ECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWSML----CL-RRI 869

Query: 143  QHSRSLVIPSLVGLCFLRELRLGNCNISE--VPNSIGG-LSCLQSLDLSG 3
              S    +PSL GLC L++L L +CNI E  +PN +GG LS L+ L+L G
Sbjct: 870  SDSTGFRLPSLSGLCSLKQLNLSDCNIKEGALPNDLGGYLSSLEYLNLKG 919


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