BLASTX nr result

ID: Atractylodes22_contig00020837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020837
         (1482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   410   e-112
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   407   e-111
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   404   e-110
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   347   5e-93
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   345   2e-92

>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
            gi|222850098|gb|EEE87645.1| f-box family protein [Populus
            trichocarpa]
          Length = 410

 Score =  410 bits (1054), Expect = e-112
 Identities = 211/405 (52%), Positives = 284/405 (70%), Gaps = 11/405 (2%)
 Frame = -1

Query: 1476 MADWSQLPRELLDLISKHLISETDLLRFRSVCTSWRSSIQPFTSR-----FPILPNAGIS 1312
            MA+W+ LP++L++LISK L + TDLLRFRSVC SWRSSI P + R     F ILPN GIS
Sbjct: 1    MAEWTHLPKDLIELISKCLDTSTDLLRFRSVCNSWRSSIPPKSPRLSSNTFKILPNDGIS 60

Query: 1311 DTTWGFYLSKRTIFRVGLPDPDSQQNPLPWLIKVERDNPQKTHLMNPLTGSEFIPLLPNF 1132
             T++GF L KR+IF +GLP+  +Q +   WL+K+E D P K HL +PL+      L  + 
Sbjct: 61   HTSFGFSLFKRSIFLIGLPNSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRCRSTSLHHSL 120

Query: 1131 PRSLDLLNFRVTELGQEYALQYISYRPHANSIGDSVTLYMEKVAFCSSGVD-GFVLLTIH 955
            PR LDL+N R+ ELG EY L ++SY+P+++S  D+  LYMEKV       +  FVLLTIH
Sbjct: 121  PRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVMIWLNCETEFVLLTIH 180

Query: 954  VSGKLALLKHGERKWNIINDLPSPYDDVLFYKGEFYAVDNTGRTVIVVVDSETTSLKVVA 775
            VSGKLA+ K G+++W IIN++PSP+DDV+ YKG FYAVDNTGRTV+V +D   T L +V 
Sbjct: 181  VSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVALD---TDLGLVG 237

Query: 774  NSVFGGDKKFLVESEGELFMVDKHLSVGPENDFDYDDENHEFYEDFDCFMSERTVKLEVY 595
            + VFGGDKK+LVES+G+L +VD +LS+  +         ++  +D   +MSERTV+ +V+
Sbjct: 238  DPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSI---GNDVVQDLVQYMSERTVRFKVF 294

Query: 594  RLDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNRVFFTGQ---SRE--DDGL 430
            +L+ E + W+EVK+L DR+LFLGD+  FSASA E  GCKGN +FF      SRE  DDG 
Sbjct: 295  KLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFEDNFFYSREEGDDGS 354

Query: 429  MKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPPWIHPNSVALED 295
            M  R +GVF+LESGCIGP+ N   YS++FWPPP WI   S+ +++
Sbjct: 355  MIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWIASTSLEVQN 399


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
            gi|222848503|gb|EEE86050.1| f-box family protein [Populus
            trichocarpa]
          Length = 469

 Score =  407 bits (1046), Expect = e-111
 Identities = 207/401 (51%), Positives = 277/401 (69%), Gaps = 11/401 (2%)
 Frame = -1

Query: 1476 MADWSQLPRELLDLISKHLISETDLLRFRSVCTSWRSSIQP-----FTSRFPILPNAGIS 1312
            MA+W+ LP++L++LISK L + TDLLRFRSVC SWRSSI P      ++ F ILPN GIS
Sbjct: 1    MAEWTHLPKDLMELISKRLDTSTDLLRFRSVCNSWRSSIPPEPPCLSSNTFKILPNDGIS 60

Query: 1311 DTTWGFYLSKRTIFRVGLPDPDSQQNPLPWLIKVERDNPQKTHLMNPLTGSEFIPLLPNF 1132
             T++GF L KRT+F VGLP+  +Q +   WLIK+E D P K HL +PL+      L  N 
Sbjct: 61   HTSFGFSLFKRTVFLVGLPNSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNNL 120

Query: 1131 PRSLDLLNFRVTELGQEYALQYISYRPHANSIGDSVTLYMEKVAFC-SSGVDGFVLLTIH 955
            PR LDL+N R+ ELG EY L +++Y+P+++S  D+  LYMEKV     + +  FVLLTIH
Sbjct: 121  PRVLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVMIWLNSLTEFVLLTIH 180

Query: 954  VSGKLALLKHGERKWNIINDLPSPYDDVLFYKGEFYAVDNTGRTVIVVVDSETTSLKVVA 775
            VSGKLA+ K G+++W IIN++PSP+DDV+ YKG FYAVDNTGRTV+V +D   T+L +V 
Sbjct: 181  VSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVAMD---TNLGLVG 237

Query: 774  NSVFGGDKKFLVESEGELFMVDKHLSVGPENDFDYDDENHEFYEDFDCFMSERTVKLEVY 595
            N VFGGDKK+LVES+G+L +VD +LS+  +         H+  +D   +MSERTV  +V+
Sbjct: 238  NPVFGGDKKYLVESKGDLLLVDMYLSIDSDEGLSI---GHDVVQDLVQYMSERTVWFKVF 294

Query: 594  RLDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNRVFFT-----GQSREDDGL 430
            +L+ E + W+EV  L DR+LFLGD+  FSASA E  GCKGN +FF       +   DDG 
Sbjct: 295  KLNEEGKCWIEVNDLEDRVLFLGDDLTFSASASELSGCKGNCIFFNDDFFYSRGEGDDGS 354

Query: 429  MKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPPWIHPNSV 307
            +  R +GVF+LESGCIGP+ N    S++FWPPP W+   S+
Sbjct: 355  LFGRDIGVFELESGCIGPLRNFPDNSKMFWPPPDWVASTSL 395


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
            vinifera]
          Length = 387

 Score =  404 bits (1038), Expect = e-110
 Identities = 210/398 (52%), Positives = 271/398 (68%), Gaps = 9/398 (2%)
 Frame = -1

Query: 1476 MADWSQLPRELLDLISKHLISETDLLRFRSVCTSWRSSI----QPFTSRFPILPNAGISD 1309
            MA+W+ LPR+LL LI+K L S  DLLRFRSVC+SWRSS     +   S  PILP  G S+
Sbjct: 1    MAEWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSE 60

Query: 1308 TTWGFYLSKRTIFRVGLPDPDSQQNPLPWLIKVERDNPQKTHLMNPLTGSEFIPLLPNFP 1129
             TW FYLSKR+I ++GLPD  +Q  P  WLIK+E D      L+NPLT  +F  L P+FP
Sbjct: 61   ITWAFYLSKRSILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFP 120

Query: 1128 RSLDLLNFRVTELGQEYALQYISYRPHANSIGDSVTLYMEKVAFCSSGVDGFVLLTIHVS 949
            ++ D    RV ELGQEY L+Y+ YRP  N+   S  LYMEKVAFCS   D F LLTIH+S
Sbjct: 121  KTFDFSGLRVFELGQEYVLEYMDYRPPGNAYLGS--LYMEKVAFCSGNGDDFWLLTIHLS 178

Query: 948  GKLALLKHGERKWNIINDLPSPYDDVLFYKGEFYAVDNTGRTVIV-VVDSETTSLKVVAN 772
            GKLA+ + G++KW II+D+ SPYDDV+F+ G+FYAVDNTGRTV+V V D  +  + + A+
Sbjct: 179  GKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAAS 238

Query: 771  SVFGGDKKFLVESEGELFMVDKHLSVGPENDFDYDDENHEFYEDFDCFMSERTVKLEVYR 592
            SVFGGDKK LVESEGEL +VD + ++       +DD+ H  +      M ER +  +V+R
Sbjct: 239  SVFGGDKKVLVESEGELLLVDTYFTM------YHDDDEHVRW------MIERMIHFKVFR 286

Query: 591  LDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNRVFFTGQS----REDDGLMK 424
            LD  EQKWVE++SLGDR+LFLGD+  FSA A +F GCKGN + FT  S     E+D   +
Sbjct: 287  LDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFTNISFFSDAEEDDASR 346

Query: 423  SRGVGVFDLESGCIGPIANNSGYSQLFWPPPPWIHPNS 310
            S  +GVFDL+SG IGP+++ + YS+  WPPP W+   S
Sbjct: 347  SGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWVSSTS 384


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score =  347 bits (890), Expect = 5e-93
 Identities = 186/399 (46%), Positives = 255/399 (63%), Gaps = 7/399 (1%)
 Frame = -1

Query: 1476 MADWSQLPRELLDLISKHLISETDLLRFRSVCTSWR----SSIQPFTSRFPILPNAGISD 1309
            MA WSQLP++LL LI++ L S  DLL  RSVC+SW     S + P  SRFPILP  G   
Sbjct: 1    MARWSQLPKDLLLLIAQRLNSHFDLLCLRSVCSSWHACVPSRLHPLPSRFPILPTNG--- 57

Query: 1308 TTWGFYLSKRTIFRVGLPDPDSQQNPLPWLIKVERDNPQKTHLMNPLTGSEFIPLLPNFP 1129
            T+WG YLS+RTI  +GLP+   Q     WLIKVE D P   HL+NPL+  +F  L PNFP
Sbjct: 58   TSWGLYLSRRTILCLGLPESHCQPTISSWLIKVEEDVPDMAHLVNPLSTFQFKHLPPNFP 117

Query: 1128 RSLDLLNFRVTELGQEYALQYISYRPHANSIGDSVTLYMEKVAFCSSG-VDGFVLLTIHV 952
            ++ D   FRV+ELGQEY LQY+++RP   +  D  +L+  KVAF S+G  + FV++TIHV
Sbjct: 118  KTFDFSRFRVSELGQEYVLQYMNHRPSGEA--DEGSLHKGKVAFSSTGNGEDFVMITIHV 175

Query: 951  SGKLALLKHGERKWNIINDLPSPYDDVLFYKGEFYAVDNTGRTVIVVVDSETTSLKVVAN 772
            SGKLA+ +HG ++  +IND PSP DD++F+ GEFYA+DNTGRTV+V + S    L ++A+
Sbjct: 176  SGKLAMFRHGNKRLILINDTPSPCDDLIFFNGEFYAIDNTGRTVVVAIGSPPV-LSLIAD 234

Query: 771  SVFGGDKKFLVESEGELFMVDKHLSVGPENDFDYDDENHEFYEDFDCFMSERTVKLEVYR 592
            SVFGGDKK LVES GEL MVD +   G                       +R V+ +V++
Sbjct: 235  SVFGGDKKSLVESNGELLMVDTYFGQGIHR------------------RMKRAVRFKVFK 276

Query: 591  LDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNRVFFTGQ--SREDDGLMKSR 418
            LD     WVEV+SLG+R+LFLG+   FSA A EF GC+GN +++T         G     
Sbjct: 277  LDQIGHMWVEVESLGNRILFLGEKSTFSAVASEFCGCEGNCIYYTNTFFCPNGQGDNAYT 336

Query: 417  GVGVFDLESGCIGPIANNSGYSQLFWPPPPWIHPNSVAL 301
             + +F+LE+G +GP+ +   YS++ WPPP W++ +++ +
Sbjct: 337  AIDIFNLENGNMGPLLSFPDYSKVIWPPPAWVYTDNIGV 375


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  345 bits (885), Expect = 2e-92
 Identities = 192/400 (48%), Positives = 250/400 (62%), Gaps = 11/400 (2%)
 Frame = -1

Query: 1476 MADWSQLPRELLDLISKHLISETDLLRFRSVCTSWRSSIQP----FTSRFPILPNAGISD 1309
            MA+WS LP++LL LIS+ L +  D +RFRSVC+SWRS + P       RFP LPN GISD
Sbjct: 1    MAEWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISD 60

Query: 1308 TTWGFYLSKRTIFRVGLPDPDSQQNPLPWLIKVERDNPQKTHLMNPLTGSEFIPLLPNFP 1129
             TWGF L+KR+IFRVG P   S      WLIKVE D      + NPL+ S F PL  NFP
Sbjct: 61   PTWGFNLTKRSIFRVGSPMDHSDG----WLIKVEEDACGMIKISNPLSKSYFKPLPKNFP 116

Query: 1128 RSLDLLNFRVTELGQEYALQYISYRPHANSIGDSVTLYMEKVAFCSSGVDG--FVLLTIH 955
            + L+LLNF V EL QEY L Y+++ P  +  GD+  LY EK+A+     DG  FVL+TIH
Sbjct: 117  KVLNLLNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGSQFVLVTIH 176

Query: 954  VSGKLALLKHGERKWNIINDLPSPYDDVLFYKGEFYAVDNTGRTVIVVVDSETTSLKVVA 775
            VSGKLA+ K  + +W+ I+    PYDDV+ + GEFYAVDN+G T +V    + T   ++A
Sbjct: 177  VSGKLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVESQHKVT---LIA 233

Query: 774  NSVFGGDKKFLVESEGELFMVDKHLSVGPENDFDYDDENHEFYEDFDCFMSERTVKLEVY 595
              VFGGDKK L+E  GEL +VD +L+V  E  F  D E  E        + E+TV  +V+
Sbjct: 234  EPVFGGDKKILMECNGELLLVDMYLTVDSEEGFGLDGEPTE------GVLHEKTVGFKVF 287

Query: 594  RLDIE-EQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNRVFFTG----QSREDDGL 430
            +L     +KW  V  LG+ MLFLG+NC FSASA    GCKGN +FFT      + ++D +
Sbjct: 288  KLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDV 347

Query: 429  MKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPPWIHPNS 310
             K   + +FDLE G I P++++  YS+LFWPPP WI   S
Sbjct: 348  FKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387


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