BLASTX nr result

ID: Atractylodes22_contig00020789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020789
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   226   3e-57
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   219   5e-55
ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|2...   215   7e-54
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   214   2e-53
gb|AFK38566.1| unknown [Medicago truncatula]                          211   2e-52

>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  226 bits (577), Expect = 3e-57
 Identities = 108/158 (68%), Positives = 126/158 (79%)
 Frame = -2

Query: 625 MGFPVGYTDXXXXXXXXXXXXXLGFIRKLISFVFRFVGLGEFLEPDFSSDPTRNEPVTHF 446
           MGFPVGYT+             LGFIRKLI+ +FR++GL +FLEPD S   T +  V  F
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLINTLFRYLGLPDFLEPDISWPETPSR-VPEF 59

Query: 445 HSVSAVLIRELLPVVKFSELVDPPESCAVCLYEFHAGDEIRRLTNCRHIFHRCCLDRWMD 266
           +S SAVLIRE+LPVVKFS+LVDPP+SCAVCLYEF   DEIRRLTNCRHIFH+ CLDRW+ 
Sbjct: 60  YSASAVLIREILPVVKFSDLVDPPDSCAVCLYEFEDHDEIRRLTNCRHIFHKACLDRWVG 119

Query: 265 HDQKTCPLCRTPFIPDDLQDSFNERLWAASGIADYYGD 152
           +DQKTCPLCRTP IPDD+Q++FNERLWAASGI D+YGD
Sbjct: 120 YDQKTCPLCRTPVIPDDMQEAFNERLWAASGIPDFYGD 157


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  219 bits (558), Expect = 5e-55
 Identities = 108/163 (66%), Positives = 122/163 (74%), Gaps = 5/163 (3%)
 Frame = -2

Query: 625 MGFPVGYTDXXXXXXXXXXXXXLGFIRKLISFVFRFVGLGEFLEPDFSSDPTRNEPVTHF 446
           MGFPVGYT+             LGFIRKLIS+ FRF+GL +FLEPD        + V  F
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDIVWTEGSTQ-VPEF 59

Query: 445 HSVSAVLIRELLPVVKFSELV-----DPPESCAVCLYEFHAGDEIRRLTNCRHIFHRCCL 281
            SVSAVLIRE+LPV+KF ELV     DPP+ CAVCLYEF   +EIRRLTNCRHIFHR CL
Sbjct: 60  QSVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNCRHIFHRSCL 119

Query: 280 DRWMDHDQKTCPLCRTPFIPDDLQDSFNERLWAASGIADYYGD 152
           DRWMD DQKTCPLCRTPFIPDD+Q++FNERLWAAS + D+YGD
Sbjct: 120 DRWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPDFYGD 162


>ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|222845276|gb|EEE82823.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  215 bits (548), Expect = 7e-54
 Identities = 106/164 (64%), Positives = 123/164 (75%), Gaps = 6/164 (3%)
 Frame = -2

Query: 625 MGFPVGYTDXXXXXXXXXXXXXLGFIRKLISFVFRFVGLGEFLEPDFSSDPTRN-----E 461
           MGFPVGY++             LGF RKLI+ +F ++GL +FLEP+ SS  T N      
Sbjct: 1   MGFPVGYSELLLPKLLLHALSVLGFFRKLINTLFHYLGLPDFLEPNTSSSSTNNIPPFGV 60

Query: 460 PVTHFHSVSAVLIRELLPVVKFSELVDPP-ESCAVCLYEFHAGDEIRRLTNCRHIFHRCC 284
           P  H HSVSA+LIRE+LPVVKFSELVDP  + CAVCLYEF   DEIRRL NCRHIFH+CC
Sbjct: 61  PEFHNHSVSALLIREILPVVKFSELVDPSADCCAVCLYEFKEVDEIRRLANCRHIFHKCC 120

Query: 283 LDRWMDHDQKTCPLCRTPFIPDDLQDSFNERLWAASGIADYYGD 152
           LDRWM +DQ TCPLCRTP IPDD+Q+SFNERLWAASGI D+YG+
Sbjct: 121 LDRWMGYDQITCPLCRTPVIPDDMQESFNERLWAASGIPDFYGE 164


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  214 bits (544), Expect = 2e-53
 Identities = 103/161 (63%), Positives = 121/161 (75%), Gaps = 3/161 (1%)
 Frame = -2

Query: 625 MGFPVGYTDXXXXXXXXXXXXXLGFIRKLISFVFRFVGLGEFLEPDFSSDPTRNEPVTHF 446
           MGFPVGYT+             LGFIRKLI  +F F+GL +FLE D S   T+ + V  +
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSWSETQAQ-VPEY 59

Query: 445 HSVSAVLIRELLPVVKFSELV---DPPESCAVCLYEFHAGDEIRRLTNCRHIFHRCCLDR 275
             VSAVLIRE+LPV+KF E V   D PESCAVCLY+F  G+EIRRLTNC+HIFHR CLDR
Sbjct: 60  PPVSAVLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDR 119

Query: 274 WMDHDQKTCPLCRTPFIPDDLQDSFNERLWAASGIADYYGD 152
           WMDHDQKTCPLCRTPF+PD++QD FN+RLWAASGI D+Y +
Sbjct: 120 WMDHDQKTCPLCRTPFVPDEMQDEFNQRLWAASGITDFYSE 160


>gb|AFK38566.1| unknown [Medicago truncatula]
          Length = 163

 Score =  211 bits (536), Expect = 2e-52
 Identities = 100/156 (64%), Positives = 118/156 (75%)
 Frame = -2

Query: 625 MGFPVGYTDXXXXXXXXXXXXXLGFIRKLISFVFRFVGLGEFLEPDFSSDPTRNEPVTHF 446
           MGFPVGYT+               FIRKLI+ +FR++GL +F+EPD    P  +  +  F
Sbjct: 1   MGFPVGYTELLFPKLVLHLLSIFTFIRKLINTIFRYMGLPDFIEPDIIW-PENSTRIPEF 59

Query: 445 HSVSAVLIRELLPVVKFSELVDPPESCAVCLYEFHAGDEIRRLTNCRHIFHRCCLDRWMD 266
            SVSA+LIRE+LPVVKF ELVDPPESCAVCL EF   DEIRRL NCRHIFHR CLDRWM 
Sbjct: 60  ESVSALLIREILPVVKFMELVDPPESCAVCLTEFEENDEIRRLANCRHIFHRGCLDRWMG 119

Query: 265 HDQKTCPLCRTPFIPDDLQDSFNERLWAASGIADYY 158
           +DQ+TCPLCRTPFIPD+LQ +FNERLWAASGI +++
Sbjct: 120 YDQRTCPLCRTPFIPDELQSAFNERLWAASGIPEFH 155


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