BLASTX nr result

ID: Atractylodes22_contig00020783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020783
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   167   8e-40
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
emb|CBI38482.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...   160   1e-37

>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/122 (64%), Positives = 95/122 (77%)
 Frame = +3

Query: 75  ESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXXDVSTSLEIFNWANTQKGYCHTF 254
           +S T+W  LLKPFD+ +LR SL R+T            DV TS+E+F WA TQKGYCH F
Sbjct: 52  DSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMF 111

Query: 255 DVYYALIDKVGAAGELKVVDRLLMQMKEEGIVFQETLFVMIMRHYQRAGLPGQATRLLLE 434
           DVYY LIDK+GAAGE K +D LLMQMK+EGIVF+E+LF++IM+HY RAGLPGQATRLLL+
Sbjct: 112 DVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 171

Query: 435 MR 440
           MR
Sbjct: 172 MR 173


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/122 (64%), Positives = 94/122 (77%)
 Frame = +3

Query: 75  ESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXXDVSTSLEIFNWANTQKGYCHTF 254
           +S T+W  LLKPFD+ +LR SL R+T            DV TS+E+F WA TQKGYCH F
Sbjct: 70  DSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMF 129

Query: 255 DVYYALIDKVGAAGELKVVDRLLMQMKEEGIVFQETLFVMIMRHYQRAGLPGQATRLLLE 434
           DVYY LIDK+GAAGE K  D LLMQMK+EGIVF+E+LF++IM+HY RAGLPGQATRLLL+
Sbjct: 130 DVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 189

Query: 435 MR 440
           MR
Sbjct: 190 MR 191


>emb|CBI38482.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/122 (64%), Positives = 94/122 (77%)
 Frame = +3

Query: 75  ESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXXDVSTSLEIFNWANTQKGYCHTF 254
           +S T+W  LLKPFD+ +LR SL R+T            DV TS+E+F WA TQKGYCH F
Sbjct: 52  DSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMF 111

Query: 255 DVYYALIDKVGAAGELKVVDRLLMQMKEEGIVFQETLFVMIMRHYQRAGLPGQATRLLLE 434
           DVYY LIDK+GAAGE K  D LLMQMK+EGIVF+E+LF++IM+HY RAGLPGQATRLLL+
Sbjct: 112 DVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 171

Query: 435 MR 440
           MR
Sbjct: 172 MR 173


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/123 (61%), Positives = 95/123 (77%)
 Frame = +3

Query: 72  SESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXXDVSTSLEIFNWANTQKGYCHT 251
           S  ET+W  LLKPFD+++LR S N++T            DV TS+EIF WA  QKGYCH+
Sbjct: 44  SAHETEWERLLKPFDLKELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHS 103

Query: 252 FDVYYALIDKVGAAGELKVVDRLLMQMKEEGIVFQETLFVMIMRHYQRAGLPGQATRLLL 431
           F VYY LIDK+GAA   KV+DRLL+QMKEEGIVF+E+LF++IM++Y RAGLPGQATRLLL
Sbjct: 104 FSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLL 163

Query: 432 EMR 440
           +M+
Sbjct: 164 DMK 166


>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score =  160 bits (405), Expect = 1e-37
 Identities = 74/123 (60%), Positives = 97/123 (78%)
 Frame = +3

Query: 72  SESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXXDVSTSLEIFNWANTQKGYCHT 251
           SE+ET+W  LLKPFD+++LR S N++T            DVSTS+ IF WA +QKGYCHT
Sbjct: 42  SENETEWERLLKPFDLKELRRSFNQITPFQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHT 101

Query: 252 FDVYYALIDKVGAAGELKVVDRLLMQMKEEGIVFQETLFVMIMRHYQRAGLPGQATRLLL 431
           FDVY+ LIDK+GAA E KV+D+LL+Q+KEEGI F+E+LF+ IM++Y RA LPGQATR+LL
Sbjct: 102 FDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLL 161

Query: 432 EMR 440
           +M+
Sbjct: 162 DMK 164


Top