BLASTX nr result

ID: Atractylodes22_contig00020779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020779
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containin...   186   6e-45
ref|XP_004158060.1| PREDICTED: katanin p80 WD40 repeat-containin...   184   3e-44
ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containin...   184   3e-44
ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu...   182   8e-44
ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containin...   172   1e-40

>ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1
           [Vitis vinifera]
          Length = 220

 Score =  186 bits (473), Expect = 6e-45
 Identities = 90/160 (56%), Positives = 118/160 (73%)
 Frame = +3

Query: 504 MMPEKAKSSPLLDDGPQTTGRGLTSKKDDDLVEDLMLTHDVFLSSLRTRLTKLQVVRHFW 683
           MMPE A++SP+L   PQ +GR  T+  +++ +ED++  HD+F+S+LR+RLTKLQVVRHFW
Sbjct: 23  MMPETARTSPMLKGQPQISGRESTAASEENTIEDVIQNHDLFISTLRSRLTKLQVVRHFW 82

Query: 684 ERNDARGAINALRNLPDHAVQADVVNVLMERMESITXXXXXXXXXXXXXXXXXXTERHVS 863
           E+ND +GAINALR LPDH+VQADVV+VLME+ME +T                   ERH +
Sbjct: 83  EQNDVKGAINALRKLPDHSVQADVVSVLMEKMEILTLDLFSCLLPVLMSLLDSNLERHAN 142

Query: 864 ASLELLLKLVAVFGPVVSSTISAPPTVGVDLHAEKRLECC 983
            SL++LLKLV+VFGPV+ S ISAPP +GV+L AE R ECC
Sbjct: 143 LSLDMLLKLVSVFGPVIHSAISAPPAIGVNLQAEHRRECC 182


>ref|XP_004158060.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            [Cucumis sativus]
          Length = 906

 Score =  184 bits (467), Expect = 3e-44
 Identities = 90/159 (56%), Positives = 116/159 (72%)
 Frame = +3

Query: 507  MPEKAKSSPLLDDGPQTTGRGLTSKKDDDLVEDLMLTHDVFLSSLRTRLTKLQVVRHFWE 686
            +PE  K+  L    PQ +GR  TS  D D++EDLM +HDVFLS+LR+RLTKLQVVRHFWE
Sbjct: 710  VPETDKTDNLQKGEPQISGRDSTSANDRDVIEDLMQSHDVFLSTLRSRLTKLQVVRHFWE 769

Query: 687  RNDARGAINALRNLPDHAVQADVVNVLMERMESITXXXXXXXXXXXXXXXXXXTERHVSA 866
            RND +GAINA+  LPDH+VQADV++VL+++M+ +T                   ERH S 
Sbjct: 770  RNDMKGAINAMTKLPDHSVQADVISVLVDKMDVLTLDLFSCLLPVLVGLLDSKIERHASL 829

Query: 867  SLELLLKLVAVFGPVVSSTISAPPTVGVDLHAEKRLECC 983
            S+E+L+KLVAVFG V+SS +SAPP VGVDLHAE+R++CC
Sbjct: 830  SMEILVKLVAVFGHVISSAVSAPPVVGVDLHAEQRVQCC 868


>ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            [Cucumis sativus]
          Length = 922

 Score =  184 bits (467), Expect = 3e-44
 Identities = 90/159 (56%), Positives = 116/159 (72%)
 Frame = +3

Query: 507  MPEKAKSSPLLDDGPQTTGRGLTSKKDDDLVEDLMLTHDVFLSSLRTRLTKLQVVRHFWE 686
            +PE  K+  L    PQ +GR  TS  D D++EDLM +HDVFLS+LR+RLTKLQVVRHFWE
Sbjct: 726  VPETDKTDNLQKGEPQISGRDSTSANDRDVIEDLMQSHDVFLSTLRSRLTKLQVVRHFWE 785

Query: 687  RNDARGAINALRNLPDHAVQADVVNVLMERMESITXXXXXXXXXXXXXXXXXXTERHVSA 866
            RND +GAINA+  LPDH+VQADV++VL+++M+ +T                   ERH S 
Sbjct: 786  RNDMKGAINAMTKLPDHSVQADVISVLVDKMDVLTLDLFSCLLPVLVGLLDSKIERHASL 845

Query: 867  SLELLLKLVAVFGPVVSSTISAPPTVGVDLHAEKRLECC 983
            S+E+L+KLVAVFG V+SS +SAPP VGVDLHAE+R++CC
Sbjct: 846  SMEILVKLVAVFGHVISSAVSAPPVVGVDLHAEQRVQCC 884


>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223539311|gb|EEF40902.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 936

 Score =  182 bits (463), Expect = 8e-44
 Identities = 122/329 (37%), Positives = 166/329 (50%), Gaps = 10/329 (3%)
 Frame = +3

Query: 27   ITSQMQVKIPDVVPCEEPEDKTSQMSVKAPDVVPYPVPEAKTFTIPEKRPDVVXXXXXXX 206
            +T+       +V P   PE    +    A  + P  VPE KT      +P++        
Sbjct: 600  LTNSTPTMSTNVTPLSLPE--AGRKPPIAISMTPRIVPETKT------KPEIAT------ 645

Query: 207  XXXPMVQKPDSGPNIKSEEARSSPVLAVQRPR-------TAPSMLP---EKGKASPVQRS 356
                     +  P++  E  R+  V  V  PR       TA +M+P    +   +P+  +
Sbjct: 646  ---------NMSPHVFPEMDRTPTVATVVTPRVMDRIPVTATNMIPLVIPETDRTPIAAT 696

Query: 357  ASSRRLIPEXXXXXXXXXXXXXXXXXXLIPERTKTSPVLVVPRYDTPKRMMPEKAKSSPL 536
              +RR+I E                   I ER ++              M     ++ P 
Sbjct: 697  NMTRRVISERNRSPIATTDMTPEA----ISERGRSPSTATNMTCHVVHEM---DRRTLPA 749

Query: 537  LDDGPQTTGRGLTSKKDDDLVEDLMLTHDVFLSSLRTRLTKLQVVRHFWERNDARGAINA 716
            + + PQ +GR   S    D+ E+LM  HDVFLS++++RLTKLQVVRHFWERND +GAINA
Sbjct: 750  MKEEPQISGRDSNSSNYRDVSEELMQAHDVFLSTIKSRLTKLQVVRHFWERNDIKGAINA 809

Query: 717  LRNLPDHAVQADVVNVLMERMESITXXXXXXXXXXXXXXXXXXTERHVSASLELLLKLVA 896
            LR LPDH+VQAD+++VLME+ME +T                   ERH   SLE+LLKLVA
Sbjct: 810  LRKLPDHSVQADIISVLMEKMEILTLDLFSCLLPVLVGLLDSKMERHTGVSLEMLLKLVA 869

Query: 897  VFGPVVSSTISAPPTVGVDLHAEKRLECC 983
            VFGPV+ STIS PP VGV+LHAE+RLECC
Sbjct: 870  VFGPVIRSTISGPPLVGVNLHAEQRLECC 898


>ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 814

 Score =  172 bits (435), Expect = 1e-40
 Identities = 88/156 (56%), Positives = 109/156 (69%)
 Frame = +3

Query: 513  EKAKSSPLLDDGPQTTGRGLTSKKDDDLVEDLMLTHDVFLSSLRTRLTKLQVVRHFWERN 692
            E  KS+  L   PQ  G    S  D +++E LM THDV LS+LR+RLTKLQVV+HFWERN
Sbjct: 620  ETDKSANFLKVEPQVLGSDSNSANDGEIIEGLMQTHDVTLSNLRSRLTKLQVVQHFWERN 679

Query: 693  DARGAINALRNLPDHAVQADVVNVLMERMESITXXXXXXXXXXXXXXXXXXTERHVSASL 872
            D +GAI+ALR LPD +VQADV++VL+++ME IT                   ERHV  SL
Sbjct: 680  DTKGAISALRKLPDQSVQADVISVLVDKMEIITLDLFSCLLPVLTGLLDSNIERHVKVSL 739

Query: 873  ELLLKLVAVFGPVVSSTISAPPTVGVDLHAEKRLEC 980
            ++LLKLVAVFGP + STISAPP+VG+DLHAE+R EC
Sbjct: 740  DMLLKLVAVFGPTIRSTISAPPSVGIDLHAEQRREC 775


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