BLASTX nr result

ID: Atractylodes22_contig00020677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020677
         (1204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   298   1e-78
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   294   3e-77
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   268   2e-69
ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containi...   268   2e-69
ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containi...   266   1e-68

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
            mitochondrial [Vitis vinifera]
          Length = 499

 Score =  298 bits (764), Expect = 1e-78
 Identities = 152/294 (51%), Positives = 200/294 (68%)
 Frame = -1

Query: 1204 VEKAEATVEKMRQMGMMTTLSYNSMLNLYKIMGDNEKLDKIHHEMIEMGVPCDKSTYYIR 1025
            +EKAEA +++MR MG + TLSYN ML LY  +G +EKLD +  EM E G+  D  TY IR
Sbjct: 152  LEKAEAIMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIR 211

Query: 1024 LSAYASASDLEGMERVLKNMEESSGLNVDWNVYIIASGGYIKSGKLDKAFEMLKKSEEHI 845
            L+AY + SD+EGME++L  +E    +N DWN YI+A+ GY+K+   +KA EMLKKSE+ I
Sbjct: 212  LNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFI 271

Query: 844  RGNSKVAALEILLRMYATLGKKEDVYRIWKLYKTSWSKVYNRGYSSMMGALVKLDDIDGA 665
             G S+    EILL +YAT+G K +VYRIW LYKT   K +N GY +M+ +L+KLDD+DGA
Sbjct: 272  SGRSRRFGYEILLTLYATMGNKTEVYRIWNLYKTI-GKFFNTGYVAMVSSLLKLDDMDGA 330

Query: 664  EKLLAEWESEKLTFDFRIPNMLINAYCIKDLLVKAEAYVGRVVDMGKQPPANTWVLFATA 485
            EK   EW S    FDFR+PN+LI AYC K LL KAE  V R ++ G++P A TW   A  
Sbjct: 331  EKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAG 390

Query: 484  YTRKNEMEKAVEMLRKCVDIEDKRGCKLDQDTFRACVEYLKGKGDLEGAEEIER 323
            Y   N+MEKAV+ L+K + +   +G K +  T  AC+EYLKGKGD+E AE + R
Sbjct: 391  YHENNQMEKAVDTLKKAL-LATSQGWKPNPVTLSACLEYLKGKGDVEEAENLIR 443



 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 29/59 (49%), Positives = 42/59 (71%)
 Frame = -1

Query: 184 DNLYSRISPVGDPNVSMIPIIDQWEKEGKFVSFQQLINIIKSLRKFHRYNHALQLSEWM 8
           ++L SRISP  D  VS++P ++QW KEG+ +  Q L  +I+ LR F RYNHAL++ EW+
Sbjct: 35  ESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  294 bits (752), Expect = 3e-77
 Identities = 150/294 (51%), Positives = 198/294 (67%)
 Frame = -1

Query: 1204 VEKAEATVEKMRQMGMMTTLSYNSMLNLYKIMGDNEKLDKIHHEMIEMGVPCDKSTYYIR 1025
            +EKAEA +++MR MG + TLSYN ML LY  +G +EKLD +  EM E G+  D  TY IR
Sbjct: 152  LEKAEAIMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIR 211

Query: 1024 LSAYASASDLEGMERVLKNMEESSGLNVDWNVYIIASGGYIKSGKLDKAFEMLKKSEEHI 845
            L+AY + SD+EGME++L  +E    +N DWN YI+A+ GY+K+   +KA EMLKKSE+ I
Sbjct: 212  LNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFI 271

Query: 844  RGNSKVAALEILLRMYATLGKKEDVYRIWKLYKTSWSKVYNRGYSSMMGALVKLDDIDGA 665
             G S+    EILL +YAT+G K + YRIW LYKT   K +N GY +M+ +L+KLDD+DGA
Sbjct: 272  SGRSRRFGYEILLTLYATMGNKTEXYRIWNLYKTI-GKFFNTGYVAMVSSLLKLDDMDGA 330

Query: 664  EKLLAEWESEKLTFDFRIPNMLINAYCIKDLLVKAEAYVGRVVDMGKQPPANTWVLFATA 485
            EK   EW S    FDFR+PN+LI AYC K LL KAE  V R ++ G++P A TW   A  
Sbjct: 331  EKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAG 390

Query: 484  YTRKNEMEKAVEMLRKCVDIEDKRGCKLDQDTFRACVEYLKGKGDLEGAEEIER 323
            Y   N+MEKAV+ L+K + +   +G K +  T  AC+EYLKGK D+E AE + R
Sbjct: 391  YHENNQMEKAVDTLKKAL-LATSQGWKPNPVTLSACLEYLKGKXDVEEAENLIR 443



 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 29/59 (49%), Positives = 42/59 (71%)
 Frame = -1

Query: 184 DNLYSRISPVGDPNVSMIPIIDQWEKEGKFVSFQQLINIIKSLRKFHRYNHALQLSEWM 8
           ++L SRISP  D  VS++P ++QW KEG+ +  Q L  +I+ LR F RYNHAL++ EW+
Sbjct: 35  ESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  268 bits (686), Expect = 2e-69
 Identities = 136/291 (46%), Positives = 194/291 (66%), Gaps = 1/291 (0%)
 Frame = -1

Query: 1198 KAEATVEKMRQMGMM-TTLSYNSMLNLYKIMGDNEKLDKIHHEMIEMGVPCDKSTYYIRL 1022
            KAEAT++KM+ +G +  +LSYN ML+LY  MG+ EKLD +  EM E G+ CD+ TY IRL
Sbjct: 158  KAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRL 217

Query: 1021 SAYASASDLEGMERVLKNMEESSGLNVDWNVYIIASGGYIKSGKLDKAFEMLKKSEEHIR 842
            +A  ++SD+EGME++L  ME    ++V ++ Y+IA+ GY+K+G +DK   MLK+SE+ I 
Sbjct: 218  NACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLIS 277

Query: 841  GNSKVAALEILLRMYATLGKKEDVYRIWKLYKTSWSKVYNRGYSSMMGALVKLDDIDGAE 662
            GN++  A E LL +Y   G K +VYRIW  YK    + +N GY  M+ +L+KLDDIDGAE
Sbjct: 278  GNTRRFAYEFLLTLYTASGNKAEVYRIWNKYK-EIGRFFNSGYICMISSLLKLDDIDGAE 336

Query: 661  KLLAEWESEKLTFDFRIPNMLINAYCIKDLLVKAEAYVGRVVDMGKQPPANTWVLFATAY 482
            ++  EW+S+K+ FD RIPN ++N Y  K  L KAE Y+ ++V  G++P A +W   A  Y
Sbjct: 337  RIFEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGY 396

Query: 481  TRKNEMEKAVEMLRKCVDIEDKRGCKLDQDTFRACVEYLKGKGDLEGAEEI 329
                +M KAVE +RK + +  K G K    T  AC+E+LKG+GD E  EE+
Sbjct: 397  HSSGQMTKAVETIRKAISV-SKPGWKPSLLTLSACLEFLKGQGDAETLEEL 446



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = -1

Query: 184 DNLYSRISPVGDPNVSMIPIIDQWEKEGKFVSFQQLINIIKSLRKFHRYNHALQLSEWMA 5
           D LY RIS  G P++S++PI+++W +EG  V   +L   +K LRK+ R+ HALQ+SEWM 
Sbjct: 39  DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98

Query: 4   N 2
           +
Sbjct: 99  D 99


>ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
            mitochondrial-like [Cucumis sativus]
          Length = 486

 Score =  268 bits (685), Expect = 2e-69
 Identities = 134/293 (45%), Positives = 196/293 (66%), Gaps = 1/293 (0%)
 Frame = -1

Query: 1204 VEKAEATVEKMRQMGMMTT-LSYNSMLNLYKIMGDNEKLDKIHHEMIEMGVPCDKSTYYI 1028
            ++KAEA ++KMR++G M T LSYN+MLNLY  +G +EKLD++  EM EMG+  ++ TY +
Sbjct: 153  LKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNV 212

Query: 1027 RLSAYASASDLEGMERVLKNMEESSGLNVDWNVYIIASGGYIKSGKLDKAFEMLKKSEEH 848
            R++AYA+ASD+  ME++L  ME    +  DW++Y     GY K+G  + +  MLKK+E+ 
Sbjct: 213  RMNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQL 272

Query: 847  IRGNSKVAALEILLRMYATLGKKEDVYRIWKLYKTSWSKVYNRGYSSMMGALVKLDDIDG 668
            I    K  A + L+ +YA +G K++VYR+W LY T+  K +N GY  ++ +L+KLDDIDG
Sbjct: 273  IGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLY-TNLQKRFNSGYLCIISSLMKLDDIDG 331

Query: 667  AEKLLAEWESEKLTFDFRIPNMLINAYCIKDLLVKAEAYVGRVVDMGKQPPANTWVLFAT 488
            AE++L EWES   +FDF+IPNM+IN+YC K  + KAEAY+ R+++ GK+P A  W   A+
Sbjct: 332  AERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLAS 391

Query: 487  AYTRKNEMEKAVEMLRKCVDIEDKRGCKLDQDTFRACVEYLKGKGDLEGAEEI 329
             Y       KA E L+K + +   R  K + D   AC+EYLK  G++E AEEI
Sbjct: 392  GYHSNGLTNKAAETLKKAISVSPPR-WKPNYDILAACLEYLKTNGNVELAEEI 443



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -1

Query: 184 DNLYSRISPVGDPNVSMIPIIDQWEKEGKFVSFQQLINIIKSLRKFHRYNHALQLSEWMA 5
           D L+ R+   GDP  S++ ++DQW +EG+ V+   L  +IK LR F R+NHALQL EW  
Sbjct: 36  DTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLCEWER 95

Query: 4   N 2
           N
Sbjct: 96  N 96


>ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
            mitochondrial-like [Cucumis sativus]
          Length = 493

 Score =  266 bits (679), Expect = 1e-68
 Identities = 134/293 (45%), Positives = 194/293 (66%), Gaps = 1/293 (0%)
 Frame = -1

Query: 1204 VEKAEATVEKMRQMGMMTT-LSYNSMLNLYKIMGDNEKLDKIHHEMIEMGVPCDKSTYYI 1028
            ++KAEA ++KMR++G M T LSYN+MLNLY  +G +EKL ++  EM EMG+  D+ TY I
Sbjct: 153  LKKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNI 212

Query: 1027 RLSAYASASDLEGMERVLKNMEESSGLNVDWNVYIIASGGYIKSGKLDKAFEMLKKSEEH 848
            R++AYA+ASD+  ME++L  ME    +  DW+ Y +   GY K+G  + +  MLKK+E+ 
Sbjct: 213  RMNAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQF 272

Query: 847  IRGNSKVAALEILLRMYATLGKKEDVYRIWKLYKTSWSKVYNRGYSSMMGALVKLDDIDG 668
            I    K  A + L+ +YA +G K++VYR+W LY T+  K +N GY  ++ +L+KLDDIDG
Sbjct: 273  IGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLY-TNLRKRFNSGYLCIISSLMKLDDIDG 331

Query: 667  AEKLLAEWESEKLTFDFRIPNMLINAYCIKDLLVKAEAYVGRVVDMGKQPPANTWVLFAT 488
            AE++L EWES   +FDFRIPNM+IN+YC+K  + KAEAY+ R+++ GK+P ANTW L A+
Sbjct: 332  AERILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKEPEANTWDLLAS 391

Query: 487  AYTRKNEMEKAVEMLRKCVDIEDKRGCKLDQDTFRACVEYLKGKGDLEGAEEI 329
             Y       K  E L+K + +      K       AC+EYLK   +++ AEEI
Sbjct: 392  GYHSNGLTNKVAETLKKAISVSPPH-WKPKYHILAACLEYLKTNENVDLAEEI 443



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -1

Query: 184 DNLYSRISPVGDPNVSMIPIIDQWEKEGKFVSFQQLINIIKSLRKFHRYNHALQLSEWMA 5
           D L+ R+   GDP  S++ ++DQW +EG+ V    L  +IK LRKF R+N ALQL EW+ 
Sbjct: 36  DTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQALQLCEWVR 95

Query: 4   N 2
           N
Sbjct: 96  N 96


Top