BLASTX nr result

ID: Atractylodes22_contig00020635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020635
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|1705...    81   8e-14
ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209...    80   2e-13
ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]              75   5e-12
pir||S46947 ribosomal protein L2 - evening primrose mitochondrio...    75   5e-12
dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana ...    75   5e-12

>ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|170522383|gb|ACB20493.1|
           ribosomal protein L2 (mitochondrion) [Carica papaya]
          Length = 335

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 7/78 (8%)
 Frame = -3

Query: 248 SFRQQEILGLGGVAEHNKSK-------LKPKAMSKEKSDEKFTVDRAPVTYILATHQMKV 90
           SFR+QE LGL G AEHN+SK       L  K + +   D    VDRAPVTYI+A+HQ++ 
Sbjct: 249 SFRRQETLGLVGAAEHNESKPKTDQGSLPAKPIGERPKDRACKVDRAPVTYIIASHQLEA 308

Query: 89  GKMVMNCDSSKRSQNELL 36
           GKMVMNCD SK S ++LL
Sbjct: 309 GKMVMNCDWSKPSTSDLL 326


>ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209954165|emb|CAQ77612.1|
           ribosomal protein L2 [Vitis vinifera]
           gi|239764759|gb|ACS15228.1| ribosomal protein L2 [Vitis
           vinifera]
          Length = 334

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
 Frame = -3

Query: 248 SFRQQEILGLGGVAEHNKSKLKP------KAMSKEKSDEKFTVDRAPVTYILATHQMKVG 87
           SFR+QE LGL G AEHN+SK K       K + +   D    VDRAPVTYI+A+HQ++ G
Sbjct: 249 SFRRQETLGLVGAAEHNESKPKTDQGFYSKPIGEGPKDGACKVDRAPVTYIIASHQLEAG 308

Query: 86  KMVMNCDSSKRSQNELL 36
           KMVMNCD SK S ++LL
Sbjct: 309 KMVMNCDWSKPSTSDLL 325


>ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]
          Length = 331

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
 Frame = -3

Query: 248 SFRQQEILGLGGVAEHNKSK-------LKPKAMSKEKSDEKFTVDRAPVTYILATHQMKV 90
           SFR+QE LGL G +E N+SK       L  K + +   D    VDRAPVTYI+A+HQ++ 
Sbjct: 245 SFRRQETLGLVGASERNESKPKTDQGSLPAKPIGEGLKDGTCKVDRAPVTYIIASHQLEA 304

Query: 89  GKMVMNCDSSKRSQNELL 36
           GKMVMNCD SK S ++LL
Sbjct: 305 GKMVMNCDWSKPSTSDLL 322


>pir||S46947 ribosomal protein L2 - evening primrose mitochondrion
           gi|516394|emb|CAA56451.1| 70s mitochondrial ribosomal
           protein L2 [Oenothera berteroana]
          Length = 332

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
 Frame = -3

Query: 248 SFRQQEILGLGGVAEHNKSK-------LKPKAMSKEKSDEKFTVDRAPVTYILATHQMKV 90
           SFR+QE  GL G AEHN+SK       L  K + +   D    VDRAPVTYI+A+HQ++ 
Sbjct: 246 SFRRQETDGLVGAAEHNESKPKTDQGSLPAKPIGEGTKDGACKVDRAPVTYIIASHQLEA 305

Query: 89  GKMVMNCDSSKRSQNELL 36
           GKMVMNCD SK S ++ L
Sbjct: 306 GKMVMNCDWSKPSTSDFL 323


>dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana tabacum]
          Length = 331

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
 Frame = -3

Query: 248 SFRQQEILGLGGVAEHNKSK-------LKPKAMSKEKSDEKFTVDRAPVTYILATHQMKV 90
           SFR+QE LGL G +E N+SK       L  K + +   D    VDRAPVTYI+A+HQ++ 
Sbjct: 245 SFRRQETLGLVGASERNESKPKTDQGSLPAKPIGEGLKDGTCKVDRAPVTYIIASHQLEA 304

Query: 89  GKMVMNCDSSKRSQNELL 36
           GKMVMNCD SK S ++LL
Sbjct: 305 GKMVMNCDWSKPSTSDLL 322


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