BLASTX nr result

ID: Atractylodes22_contig00020617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020617
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   195   6e-58
ref|XP_004152927.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   188   4e-57
ref|NP_173961.3| helicase associated domain-containing protein [...   190   3e-56
ref|XP_004170072.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   182   3e-55
ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   188   6e-52

>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
           vinifera]
          Length = 713

 Score =  195 bits (496), Expect(2) = 6e-58
 Identities = 99/126 (78%), Positives = 108/126 (85%)
 Frame = -1

Query: 568 RRQKIEHQRRSLPIASVEKRLVEEVRKNDVLIIVGETGSGKTTQLPQYLYNGGFCRDGGT 389
           R+Q++E QR++LPIASVEKRLVEEV+KND LIIVGETGSGKTTQLPQ+L NGGFC DG  
Sbjct: 26  RKQRLEQQRKALPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLPQFLLNGGFCHDGKI 85

Query: 388 IGITQPXXXXXXXXXXXXAEECGVELGQKVGYSIRFEDVTSTSTRIKYMTDGLLLREALL 209
           IGITQP            AEECGVELGQKVGYSIRFEDVTS+STRIKYMTDGLLLREALL
Sbjct: 86  IGITQPRRVAAVTVAKRVAEECGVELGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALL 145

Query: 208 DPYLSR 191
           DP+LSR
Sbjct: 146 DPFLSR 151



 Score = 55.5 bits (132), Expect(2) = 6e-58
 Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -2

Query: 195 QGVQKKRSQSSSEPNN-DHVKANNGTLVKEENNGQASSVLKPHLGRRLNPLKLIIMSASL 19
           + VQ  RS+S ++  N ++ +AN G L+K EN+    S+LK   G +   LKLIIMSASL
Sbjct: 175 KNVQNARSRSINKCLNIENTEANYGKLLKRENDANCVSILKRCQGVKFPSLKLIIMSASL 234

Query: 18  DARGFS 1
           DARGFS
Sbjct: 235 DARGFS 240


>ref|XP_004152927.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
          Length = 709

 Score =  188 bits (478), Expect(2) = 4e-57
 Identities = 94/139 (67%), Positives = 111/139 (79%)
 Frame = -1

Query: 607 KLLNADQKSDFFARRQKIEHQRRSLPIASVEKRLVEEVRKNDVLIIVGETGSGKTTQLPQ 428
           K+   D KS+  +R++K+   R+SLP+ASVE  L++EV +ND LIIVGETGSGKTTQ+PQ
Sbjct: 9   KVSTNDCKSENVSRKRKLAEHRKSLPVASVESSLMQEVLRNDTLIIVGETGSGKTTQIPQ 68

Query: 427 YLYNGGFCRDGGTIGITQPXXXXXXXXXXXXAEECGVELGQKVGYSIRFEDVTSTSTRIK 248
           +L+N GFCRDG  IG+TQP            AEECGVE+GQKVGYSIRFEDVTS+STRIK
Sbjct: 69  FLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIRFEDVTSSSTRIK 128

Query: 247 YMTDGLLLREALLDPYLSR 191
           YMTDGLLLREALLDPYLSR
Sbjct: 129 YMTDGLLLREALLDPYLSR 147



 Score = 59.7 bits (143), Expect(2) = 4e-57
 Identities = 36/63 (57%), Positives = 43/63 (68%)
 Frame = -2

Query: 189 VQKKRSQSSSEPNNDHVKANNGTLVKEENNGQASSVLKPHLGRRLNPLKLIIMSASLDAR 10
           VQK RS+S ++  N      NG L K  NNG+  S L+ H GR+L+PLKLIIMSASLDAR
Sbjct: 173 VQKTRSRSLNDSFNTENMNTNGKLEKG-NNGKYVSSLRQHRGRKLHPLKLIIMSASLDAR 231

Query: 9   GFS 1
            FS
Sbjct: 232 LFS 234


>ref|NP_173961.3| helicase associated domain-containing protein [Arabidopsis
           thaliana] gi|332192562|gb|AEE30683.1| helicase
           associated domain-containing protein [Arabidopsis
           thaliana]
          Length = 717

 Score =  190 bits (482), Expect(2) = 3e-56
 Identities = 97/128 (75%), Positives = 106/128 (82%)
 Frame = -1

Query: 574 FARRQKIEHQRRSLPIASVEKRLVEEVRKNDVLIIVGETGSGKTTQLPQYLYNGGFCRDG 395
           F+ RQKI   RRSLPIASVEKRLVEEV+KND+LIIVGETGSGKTTQLPQ+LYN GFCR+G
Sbjct: 28  FSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREG 87

Query: 394 GTIGITQPXXXXXXXXXXXXAEECGVELGQKVGYSIRFEDVTSTSTRIKYMTDGLLLREA 215
             IGITQP            AEEC V+LGQKVGYSIRF+D TS STR+KYMTDGLLLREA
Sbjct: 88  KMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREA 147

Query: 214 LLDPYLSR 191
           LLDP+LSR
Sbjct: 148 LLDPHLSR 155



 Score = 55.1 bits (131), Expect(2) = 3e-56
 Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = -2

Query: 189 VQKKRSQSSSEPNN-DHVKANNGTLVKEENNGQASSVLKPHLGRRLNPLKLIIMSASLDA 13
           +Q+ RSQ  SE     +V +   T  ++ N  Q + VLK + GR+L+PLKLIIMSASLDA
Sbjct: 181 IQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDA 240

Query: 12  RGFS 1
           R FS
Sbjct: 241 RVFS 244


>ref|XP_004170072.1| PREDICTED: ATP-dependent RNA helicase dhx8-like, partial [Cucumis
           sativus]
          Length = 694

 Score =  182 bits (462), Expect(2) = 3e-55
 Identities = 89/126 (70%), Positives = 104/126 (82%)
 Frame = -1

Query: 568 RRQKIEHQRRSLPIASVEKRLVEEVRKNDVLIIVGETGSGKTTQLPQYLYNGGFCRDGGT 389
           +++K+   R+SLP+ASVE  L++EV +ND LIIVGETGSGKTTQ+PQ+L+N GFCRDG  
Sbjct: 7   KKRKLAEHRKSLPVASVESSLMQEVLRNDTLIIVGETGSGKTTQIPQFLFNAGFCRDGKA 66

Query: 388 IGITQPXXXXXXXXXXXXAEECGVELGQKVGYSIRFEDVTSTSTRIKYMTDGLLLREALL 209
           IG+TQP            AEECGVE+GQKVGYSIRFEDVTS+STRIKYMTDGLLLREALL
Sbjct: 67  IGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALL 126

Query: 208 DPYLSR 191
           DPYLSR
Sbjct: 127 DPYLSR 132



 Score = 59.7 bits (143), Expect(2) = 3e-55
 Identities = 36/63 (57%), Positives = 43/63 (68%)
 Frame = -2

Query: 189 VQKKRSQSSSEPNNDHVKANNGTLVKEENNGQASSVLKPHLGRRLNPLKLIIMSASLDAR 10
           VQK RS+S ++  N      NG L K  NNG+  S L+ H GR+L+PLKLIIMSASLDAR
Sbjct: 158 VQKTRSRSLNDSFNTENMNTNGKLEKG-NNGKYVSSLRQHRGRKLHPLKLIIMSASLDAR 216

Query: 9   GFS 1
            FS
Sbjct: 217 LFS 219


>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Glycine max]
          Length = 705

 Score =  188 bits (478), Expect(2) = 6e-52
 Identities = 96/135 (71%), Positives = 110/135 (81%)
 Frame = -1

Query: 595 ADQKSDFFARRQKIEHQRRSLPIASVEKRLVEEVRKNDVLIIVGETGSGKTTQLPQYLYN 416
           +++++ F  RRQKI  QR+SLPIA VEKRLVEEVRK+DVLIIVGETGSGKTTQ+PQ+L++
Sbjct: 10  SNRQTQFSERRQKIIQQRKSLPIAPVEKRLVEEVRKHDVLIIVGETGSGKTTQIPQFLFD 69

Query: 415 GGFCRDGGTIGITQPXXXXXXXXXXXXAEECGVELGQKVGYSIRFEDVTSTSTRIKYMTD 236
            GFC DG  IGITQP            AEECGVELGQKVGYS+RF+D TS  TRIKYMTD
Sbjct: 70  AGFCCDGRVIGITQPRRVAAVTVAKRVAEECGVELGQKVGYSVRFDDATSGLTRIKYMTD 129

Query: 235 GLLLREALLDPYLSR 191
           GLLLREALLDPYLS+
Sbjct: 130 GLLLREALLDPYLSK 144



 Score = 42.4 bits (98), Expect(2) = 6e-52
 Identities = 28/65 (43%), Positives = 34/65 (52%)
 Frame = -2

Query: 195 QGVQKKRSQSSSEPNNDHVKANNGTLVKEENNGQASSVLKPHLGRRLNPLKLIIMSASLD 16
           + VQ  RS S S     +    N   + E+ N Q+   LK     +  PLKLIIMSASLD
Sbjct: 168 KSVQLARSSSVSGGQGLNFGNKNMNKLFEKENDQSGIFLKKPRHEKYAPLKLIIMSASLD 227

Query: 15  ARGFS 1
           AR FS
Sbjct: 228 ARAFS 232


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